Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen

Genomic analysis of Clostridium sp. NCR, an anaerobic Gram positive bacterium which was isolated from rumen fluid of Mehsani breed of buffalo revealed presence of various environmental gene tags (EGTs) involved in pathways for utilizing a wide range of substrates. Here we report the sequence of this...

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Detalles Bibliográficos
Autores principales: Nathani, Neelam M., Duggirala, Srinivas M., M., Chandra Shekar, Kothari, Ramesh K., Joshi, Chaitanya G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Data in Brief
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583630/
https://www.ncbi.nlm.nih.gov/pubmed/26484236
http://dx.doi.org/10.1016/j.gdata.2015.05.017
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author Nathani, Neelam M.
Duggirala, Srinivas M.
M., Chandra Shekar
Kothari, Ramesh K.
Joshi, Chaitanya G.
author_facet Nathani, Neelam M.
Duggirala, Srinivas M.
M., Chandra Shekar
Kothari, Ramesh K.
Joshi, Chaitanya G.
author_sort Nathani, Neelam M.
collection PubMed
description Genomic analysis of Clostridium sp. NCR, an anaerobic Gram positive bacterium which was isolated from rumen fluid of Mehsani breed of buffalo revealed presence of various environmental gene tags (EGTs) involved in pathways for utilizing a wide range of substrates. Here we report the sequence of this rumen isolate, its whole genome sequence has been deposited in DDBJ/EMBL/GenBank under the accession number JQHY00000000. The genome comprises of a 3.62-Mb draft genome with a G + C content of 28.10%, which encodes a total of 3126 proteins. Functional analysis provides information about the microbe's role in maintaining host homeostasis and its fiber degradation potential.
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spelling pubmed-45836302015-10-19 Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen Nathani, Neelam M. Duggirala, Srinivas M. M., Chandra Shekar Kothari, Ramesh K. Joshi, Chaitanya G. Genom Data Data in Brief Genomic analysis of Clostridium sp. NCR, an anaerobic Gram positive bacterium which was isolated from rumen fluid of Mehsani breed of buffalo revealed presence of various environmental gene tags (EGTs) involved in pathways for utilizing a wide range of substrates. Here we report the sequence of this rumen isolate, its whole genome sequence has been deposited in DDBJ/EMBL/GenBank under the accession number JQHY00000000. The genome comprises of a 3.62-Mb draft genome with a G + C content of 28.10%, which encodes a total of 3126 proteins. Functional analysis provides information about the microbe's role in maintaining host homeostasis and its fiber degradation potential. Elsevier 2015-05-30 /pmc/articles/PMC4583630/ /pubmed/26484236 http://dx.doi.org/10.1016/j.gdata.2015.05.017 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Nathani, Neelam M.
Duggirala, Srinivas M.
M., Chandra Shekar
Kothari, Ramesh K.
Joshi, Chaitanya G.
Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title_full Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title_fullStr Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title_full_unstemmed Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title_short Isolation of chitinolytic Clostridium sp. NCR from Mehsani buffalo rumen, its genomic analysis and potential role in rumen
title_sort isolation of chitinolytic clostridium sp. ncr from mehsani buffalo rumen, its genomic analysis and potential role in rumen
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583630/
https://www.ncbi.nlm.nih.gov/pubmed/26484236
http://dx.doi.org/10.1016/j.gdata.2015.05.017
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