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Transcriptomics analyses of soybean leaf and root samples during water-deficit

Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we...

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Detalles Bibliográficos
Autores principales: Tripathi, Prateek, Rabara, Roel C., Shen, Qingxi J., Rushton, Paul J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583655/
https://www.ncbi.nlm.nih.gov/pubmed/26484247
http://dx.doi.org/10.1016/j.gdata.2015.05.036
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author Tripathi, Prateek
Rabara, Roel C.
Shen, Qingxi J.
Rushton, Paul J.
author_facet Tripathi, Prateek
Rabara, Roel C.
Shen, Qingxi J.
Rushton, Paul J.
author_sort Tripathi, Prateek
collection PubMed
description Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we documented the details of the methods and quality controls used and considered in our time course-based transcriptome profile of soybean plants under water deficit conditions using microarray technology. The findings of this study are recently published by the Rushton lab in BMC Genomics for a comparative study of tobacco and Soybean (Rabara et al., 2015) [2]. The raw microarray data set is deposited in GEO database with accession number GSE49537.
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spelling pubmed-45836552015-10-19 Transcriptomics analyses of soybean leaf and root samples during water-deficit Tripathi, Prateek Rabara, Roel C. Shen, Qingxi J. Rushton, Paul J. Genom Data Data in Brief Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we documented the details of the methods and quality controls used and considered in our time course-based transcriptome profile of soybean plants under water deficit conditions using microarray technology. The findings of this study are recently published by the Rushton lab in BMC Genomics for a comparative study of tobacco and Soybean (Rabara et al., 2015) [2]. The raw microarray data set is deposited in GEO database with accession number GSE49537. Elsevier 2015-06-04 /pmc/articles/PMC4583655/ /pubmed/26484247 http://dx.doi.org/10.1016/j.gdata.2015.05.036 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data in Brief
Tripathi, Prateek
Rabara, Roel C.
Shen, Qingxi J.
Rushton, Paul J.
Transcriptomics analyses of soybean leaf and root samples during water-deficit
title Transcriptomics analyses of soybean leaf and root samples during water-deficit
title_full Transcriptomics analyses of soybean leaf and root samples during water-deficit
title_fullStr Transcriptomics analyses of soybean leaf and root samples during water-deficit
title_full_unstemmed Transcriptomics analyses of soybean leaf and root samples during water-deficit
title_short Transcriptomics analyses of soybean leaf and root samples during water-deficit
title_sort transcriptomics analyses of soybean leaf and root samples during water-deficit
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583655/
https://www.ncbi.nlm.nih.gov/pubmed/26484247
http://dx.doi.org/10.1016/j.gdata.2015.05.036
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