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Transcriptomics analyses of soybean leaf and root samples during water-deficit
Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583655/ https://www.ncbi.nlm.nih.gov/pubmed/26484247 http://dx.doi.org/10.1016/j.gdata.2015.05.036 |
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author | Tripathi, Prateek Rabara, Roel C. Shen, Qingxi J. Rushton, Paul J. |
author_facet | Tripathi, Prateek Rabara, Roel C. Shen, Qingxi J. Rushton, Paul J. |
author_sort | Tripathi, Prateek |
collection | PubMed |
description | Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we documented the details of the methods and quality controls used and considered in our time course-based transcriptome profile of soybean plants under water deficit conditions using microarray technology. The findings of this study are recently published by the Rushton lab in BMC Genomics for a comparative study of tobacco and Soybean (Rabara et al., 2015) [2]. The raw microarray data set is deposited in GEO database with accession number GSE49537. |
format | Online Article Text |
id | pubmed-4583655 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-45836552015-10-19 Transcriptomics analyses of soybean leaf and root samples during water-deficit Tripathi, Prateek Rabara, Roel C. Shen, Qingxi J. Rushton, Paul J. Genom Data Data in Brief Drought being a major challenge for crop productivity and yield affects multigenic and quantitative traits. It is also well documented that water stress shows a cross talk with other abiotic stresses such as high temperature and high light intensities (Tripathi et al., 2013) [1]. In this report, we documented the details of the methods and quality controls used and considered in our time course-based transcriptome profile of soybean plants under water deficit conditions using microarray technology. The findings of this study are recently published by the Rushton lab in BMC Genomics for a comparative study of tobacco and Soybean (Rabara et al., 2015) [2]. The raw microarray data set is deposited in GEO database with accession number GSE49537. Elsevier 2015-06-04 /pmc/articles/PMC4583655/ /pubmed/26484247 http://dx.doi.org/10.1016/j.gdata.2015.05.036 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data in Brief Tripathi, Prateek Rabara, Roel C. Shen, Qingxi J. Rushton, Paul J. Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title | Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title_full | Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title_fullStr | Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title_full_unstemmed | Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title_short | Transcriptomics analyses of soybean leaf and root samples during water-deficit |
title_sort | transcriptomics analyses of soybean leaf and root samples during water-deficit |
topic | Data in Brief |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583655/ https://www.ncbi.nlm.nih.gov/pubmed/26484247 http://dx.doi.org/10.1016/j.gdata.2015.05.036 |
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