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Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice

The Nod-like receptor NLRP3 is involved in the formation of NLRP3. Up to now, the immunological functions of NLRP3 independently of inflammasome is unclear. In this dataset containing 6 samples (T(H)0, T(H)2 cells at day 3 and day 6 in wild type or Nlrp3 deficient cells), we show that NLRP3 expressi...

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Autores principales: Bruchard, Mélanie, Boidot, Romain, Ghiringhelli, François, Végran, Frédérique
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583695/
https://www.ncbi.nlm.nih.gov/pubmed/26484275
http://dx.doi.org/10.1016/j.gdata.2015.06.031
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author Bruchard, Mélanie
Boidot, Romain
Ghiringhelli, François
Végran, Frédérique
author_facet Bruchard, Mélanie
Boidot, Romain
Ghiringhelli, François
Végran, Frédérique
author_sort Bruchard, Mélanie
collection PubMed
description The Nod-like receptor NLRP3 is involved in the formation of NLRP3. Up to now, the immunological functions of NLRP3 independently of inflammasome is unclear. In this dataset containing 6 samples (T(H)0, T(H)2 cells at day 3 and day 6 in wild type or Nlrp3 deficient cells), we show that NLRP3 expression in CD4(+) T cells supports a T helper 2 (T(H)2) transcriptional program in a cell-intrinsic manner (raw and normalized data are accessible on Gene Expression Omnibus database under the number GSE54561, http://www.dtd.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54561). Indeed, NLRP3 positively-regulated T(H)2 program independently of inflammasome formation. These data indicated that T(H)2 specific genes such as cMaf or Il4 were not induced in Nlrp3 deficient cells. These results demonstrate the capacity of NLRP3 to act as a key transcription factor in T(H)2 differentiation.
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spelling pubmed-45836952015-10-19 Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice Bruchard, Mélanie Boidot, Romain Ghiringhelli, François Végran, Frédérique Genom Data Data in Brief The Nod-like receptor NLRP3 is involved in the formation of NLRP3. Up to now, the immunological functions of NLRP3 independently of inflammasome is unclear. In this dataset containing 6 samples (T(H)0, T(H)2 cells at day 3 and day 6 in wild type or Nlrp3 deficient cells), we show that NLRP3 expression in CD4(+) T cells supports a T helper 2 (T(H)2) transcriptional program in a cell-intrinsic manner (raw and normalized data are accessible on Gene Expression Omnibus database under the number GSE54561, http://www.dtd.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54561). Indeed, NLRP3 positively-regulated T(H)2 program independently of inflammasome formation. These data indicated that T(H)2 specific genes such as cMaf or Il4 were not induced in Nlrp3 deficient cells. These results demonstrate the capacity of NLRP3 to act as a key transcription factor in T(H)2 differentiation. Elsevier 2015-07-09 /pmc/articles/PMC4583695/ /pubmed/26484275 http://dx.doi.org/10.1016/j.gdata.2015.06.031 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Data in Brief
Bruchard, Mélanie
Boidot, Romain
Ghiringhelli, François
Végran, Frédérique
Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title_full Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title_fullStr Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title_full_unstemmed Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title_short Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
title_sort transcriptome analysis of t(h)2 cd4(+) t cells differentiated from wild-type and nlrp3ko mice
topic Data in Brief
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4583695/
https://www.ncbi.nlm.nih.gov/pubmed/26484275
http://dx.doi.org/10.1016/j.gdata.2015.06.031
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