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Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro
Aristolochic acids (AAs) are the active components of herbal drugs derived from Aristolochia species that have been used for medicinal purposes since antiquity. However, AAs have recently been discovered to be highly nephrotoxic and induced urothelial cancer in humans and malignant tumors in the kid...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4584013/ https://www.ncbi.nlm.nih.gov/pubmed/26484264 http://dx.doi.org/10.1016/j.gdata.2015.05.028 |
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author | Bloch, Katarzyna M. Evans, Andrew Lock, Edward A. |
author_facet | Bloch, Katarzyna M. Evans, Andrew Lock, Edward A. |
author_sort | Bloch, Katarzyna M. |
collection | PubMed |
description | Aristolochic acids (AAs) are the active components of herbal drugs derived from Aristolochia species that have been used for medicinal purposes since antiquity. However, AAs have recently been discovered to be highly nephrotoxic and induced urothelial cancer in humans and malignant tumors in the kidney and urinary tract of rodents. In this study, we exposed rat renal proximal tubule cells in vitro to a sub-cytotoxic level of AAs at three different time points (6 h, 24 h and 72 h). We then analyzed the gene expression profile after the compound exposure. Functional analysis with Ingenuity Pathways Analysis and DAVID tools revealed that at the late time point (72 h) there are many significantly altered genes involved in cancer-related pathways such as p53 signaling. MIAMI-compliant microarray data are deposited in the NCBI GEO database under accession number GSE68687 and can be found at: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE68687. |
format | Online Article Text |
id | pubmed-4584013 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-45840132015-10-19 Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro Bloch, Katarzyna M. Evans, Andrew Lock, Edward A. Genom Data Data in Brief Aristolochic acids (AAs) are the active components of herbal drugs derived from Aristolochia species that have been used for medicinal purposes since antiquity. However, AAs have recently been discovered to be highly nephrotoxic and induced urothelial cancer in humans and malignant tumors in the kidney and urinary tract of rodents. In this study, we exposed rat renal proximal tubule cells in vitro to a sub-cytotoxic level of AAs at three different time points (6 h, 24 h and 72 h). We then analyzed the gene expression profile after the compound exposure. Functional analysis with Ingenuity Pathways Analysis and DAVID tools revealed that at the late time point (72 h) there are many significantly altered genes involved in cancer-related pathways such as p53 signaling. MIAMI-compliant microarray data are deposited in the NCBI GEO database under accession number GSE68687 and can be found at: http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE68687. Elsevier 2015-06-01 /pmc/articles/PMC4584013/ /pubmed/26484264 http://dx.doi.org/10.1016/j.gdata.2015.05.028 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data in Brief Bloch, Katarzyna M. Evans, Andrew Lock, Edward A. Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title | Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title_full | Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title_fullStr | Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title_full_unstemmed | Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title_short | Aristolochic acids — Induced transcriptomic responses in rat renal proximal tubule cells in vitro |
title_sort | aristolochic acids — induced transcriptomic responses in rat renal proximal tubule cells in vitro |
topic | Data in Brief |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4584013/ https://www.ncbi.nlm.nih.gov/pubmed/26484264 http://dx.doi.org/10.1016/j.gdata.2015.05.028 |
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