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Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain

Halophilic Martelella strain AD-3, isolated from highly saline petroleum-contaminated soil, can efficiently degrade polycyclic aromatic hydrocarbons (PAHs), such as phenanthrene and anthracene, in 3–5% salinity. Gentisic acid is a key intermediate in the microbial degradation of PAH compounds. Howev...

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Autores principales: Huang, Ling, Hu, Haiyang, Tang, Hongzhi, Liu, Yongdi, Xu, Ping, Shi, Jie, Lin, Kuangfei, Luo, Qishi, Cui, Changzheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4585797/
https://www.ncbi.nlm.nih.gov/pubmed/26394696
http://dx.doi.org/10.1038/srep14307
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author Huang, Ling
Hu, Haiyang
Tang, Hongzhi
Liu, Yongdi
Xu, Ping
Shi, Jie
Lin, Kuangfei
Luo, Qishi
Cui, Changzheng
author_facet Huang, Ling
Hu, Haiyang
Tang, Hongzhi
Liu, Yongdi
Xu, Ping
Shi, Jie
Lin, Kuangfei
Luo, Qishi
Cui, Changzheng
author_sort Huang, Ling
collection PubMed
description Halophilic Martelella strain AD-3, isolated from highly saline petroleum-contaminated soil, can efficiently degrade polycyclic aromatic hydrocarbons (PAHs), such as phenanthrene and anthracene, in 3–5% salinity. Gentisic acid is a key intermediate in the microbial degradation of PAH compounds. However, there is little information on PAH degradation by moderately halophilic bacteria. In this study, a 1,077-bp long gene encoding gentisate 1,2-dioxygenase (GDO) from a halophilic Martelella strain AD-3 was cloned, sequenced, and expressed in Escherichia coli. The recombinant enzyme GDO was purified and characterized in detail. By using the (18)O isotope experiment and LC-MS analysis, the sources of the two oxygen atoms added onto maleylpyruvate were identified as H(2)O and O(2), respectively. The K(m) and k(cat) values for gentisic acid were determined to be 26.64 μM and 161.29 s(−1), respectively. In addition, optimal GDO activity was observed at 30 °C, pH 7.0, and at 12% salinity. Site-directed mutagenesis demonstrated the importance of four highly conserved His residues at positions 155, 157, 167, and 169 for enzyme activity. This finding provides new insights into mechanism and variety of gentisate 1,2-dioxygenase for PAH degradation in high saline conditions.
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spelling pubmed-45857972015-09-29 Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain Huang, Ling Hu, Haiyang Tang, Hongzhi Liu, Yongdi Xu, Ping Shi, Jie Lin, Kuangfei Luo, Qishi Cui, Changzheng Sci Rep Article Halophilic Martelella strain AD-3, isolated from highly saline petroleum-contaminated soil, can efficiently degrade polycyclic aromatic hydrocarbons (PAHs), such as phenanthrene and anthracene, in 3–5% salinity. Gentisic acid is a key intermediate in the microbial degradation of PAH compounds. However, there is little information on PAH degradation by moderately halophilic bacteria. In this study, a 1,077-bp long gene encoding gentisate 1,2-dioxygenase (GDO) from a halophilic Martelella strain AD-3 was cloned, sequenced, and expressed in Escherichia coli. The recombinant enzyme GDO was purified and characterized in detail. By using the (18)O isotope experiment and LC-MS analysis, the sources of the two oxygen atoms added onto maleylpyruvate were identified as H(2)O and O(2), respectively. The K(m) and k(cat) values for gentisic acid were determined to be 26.64 μM and 161.29 s(−1), respectively. In addition, optimal GDO activity was observed at 30 °C, pH 7.0, and at 12% salinity. Site-directed mutagenesis demonstrated the importance of four highly conserved His residues at positions 155, 157, 167, and 169 for enzyme activity. This finding provides new insights into mechanism and variety of gentisate 1,2-dioxygenase for PAH degradation in high saline conditions. Nature Publishing Group 2015-09-23 /pmc/articles/PMC4585797/ /pubmed/26394696 http://dx.doi.org/10.1038/srep14307 Text en Copyright © 2015, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Huang, Ling
Hu, Haiyang
Tang, Hongzhi
Liu, Yongdi
Xu, Ping
Shi, Jie
Lin, Kuangfei
Luo, Qishi
Cui, Changzheng
Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title_full Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title_fullStr Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title_full_unstemmed Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title_short Identification and Characterization of a Novel Gentisate 1,2-Dioxygenase Gene from a Halophilic Martelella Strain
title_sort identification and characterization of a novel gentisate 1,2-dioxygenase gene from a halophilic martelella strain
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4585797/
https://www.ncbi.nlm.nih.gov/pubmed/26394696
http://dx.doi.org/10.1038/srep14307
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