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Distinguishing Asthma Phenotypes Using Machine Learning Approaches

Asthma is not a single disease, but an umbrella term for a number of distinct diseases, each of which are caused by a distinct underlying pathophysiological mechanism. These discrete disease entities are often labelled as ‘asthma endotypes’. The discovery of different asthma subtypes has moved from...

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Detalles Bibliográficos
Autores principales: Howard, Rebecca, Rattray, Magnus, Prosperi, Mattia, Custovic, Adnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586004/
https://www.ncbi.nlm.nih.gov/pubmed/26143394
http://dx.doi.org/10.1007/s11882-015-0542-0
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author Howard, Rebecca
Rattray, Magnus
Prosperi, Mattia
Custovic, Adnan
author_facet Howard, Rebecca
Rattray, Magnus
Prosperi, Mattia
Custovic, Adnan
author_sort Howard, Rebecca
collection PubMed
description Asthma is not a single disease, but an umbrella term for a number of distinct diseases, each of which are caused by a distinct underlying pathophysiological mechanism. These discrete disease entities are often labelled as ‘asthma endotypes’. The discovery of different asthma subtypes has moved from subjective approaches in which putative phenotypes are assigned by experts to data-driven ones which incorporate machine learning. This review focuses on the methodological developments of one such machine learning technique—latent class analysis—and how it has contributed to distinguishing asthma and wheezing subtypes in childhood. It also gives a clinical perspective, presenting the findings of studies from the past 5 years that used this approach. The identification of true asthma endotypes may be a crucial step towards understanding their distinct pathophysiological mechanisms, which could ultimately lead to more precise prevention strategies, identification of novel therapeutic targets and the development of effective personalized therapies.
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spelling pubmed-45860042015-10-02 Distinguishing Asthma Phenotypes Using Machine Learning Approaches Howard, Rebecca Rattray, Magnus Prosperi, Mattia Custovic, Adnan Curr Allergy Asthma Rep Immunologic/Diagnostic Tests in Allergy (M Chapman and A Pomés, Section Editors) Asthma is not a single disease, but an umbrella term for a number of distinct diseases, each of which are caused by a distinct underlying pathophysiological mechanism. These discrete disease entities are often labelled as ‘asthma endotypes’. The discovery of different asthma subtypes has moved from subjective approaches in which putative phenotypes are assigned by experts to data-driven ones which incorporate machine learning. This review focuses on the methodological developments of one such machine learning technique—latent class analysis—and how it has contributed to distinguishing asthma and wheezing subtypes in childhood. It also gives a clinical perspective, presenting the findings of studies from the past 5 years that used this approach. The identification of true asthma endotypes may be a crucial step towards understanding their distinct pathophysiological mechanisms, which could ultimately lead to more precise prevention strategies, identification of novel therapeutic targets and the development of effective personalized therapies. Springer US 2015-07-05 2015 /pmc/articles/PMC4586004/ /pubmed/26143394 http://dx.doi.org/10.1007/s11882-015-0542-0 Text en © Springer Science+Business Media New York 2015
spellingShingle Immunologic/Diagnostic Tests in Allergy (M Chapman and A Pomés, Section Editors)
Howard, Rebecca
Rattray, Magnus
Prosperi, Mattia
Custovic, Adnan
Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title_full Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title_fullStr Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title_full_unstemmed Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title_short Distinguishing Asthma Phenotypes Using Machine Learning Approaches
title_sort distinguishing asthma phenotypes using machine learning approaches
topic Immunologic/Diagnostic Tests in Allergy (M Chapman and A Pomés, Section Editors)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586004/
https://www.ncbi.nlm.nih.gov/pubmed/26143394
http://dx.doi.org/10.1007/s11882-015-0542-0
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