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Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola

The aim of the present study is to apply simple ODE models in the area of modeling the spread of emerging infectious diseases and show the importance of model selection in estimating parameters, the basic reproduction number, turning point, and final size. To quantify the plausibility of each model,...

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Detalles Bibliográficos
Autores principales: Liu, Wendi, Tang, Sanyi, Xiao, Yanni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586906/
https://www.ncbi.nlm.nih.gov/pubmed/26451161
http://dx.doi.org/10.1155/2015/207105
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author Liu, Wendi
Tang, Sanyi
Xiao, Yanni
author_facet Liu, Wendi
Tang, Sanyi
Xiao, Yanni
author_sort Liu, Wendi
collection PubMed
description The aim of the present study is to apply simple ODE models in the area of modeling the spread of emerging infectious diseases and show the importance of model selection in estimating parameters, the basic reproduction number, turning point, and final size. To quantify the plausibility of each model, given the data and the set of four models including Logistic, Gompertz, Rosenzweg, and Richards models, the Bayes factors are calculated and the precise estimates of the best fitted model parameters and key epidemic characteristics have been obtained. In particular, for Ebola the basic reproduction numbers are 1.3522 (95% CI (1.3506, 1.3537)), 1.2101 (95% CI (1.2084, 1.2119)), 3.0234 (95% CI (2.6063, 3.4881)), and 1.9018 (95% CI (1.8565, 1.9478)), the turning points are November 7,November 17, October 2, and November 3, 2014, and the final sizes until December 2015 are 25794 (95% CI (25630, 25958)), 3916 (95% CI (3865, 3967)), 9886 (95% CI (9740, 10031)), and 12633 (95% CI (12515, 12750)) for West Africa, Guinea, Liberia, and Sierra Leone, respectively. The main results confirm that model selection is crucial in evaluating and predicting the important quantities describing the emerging infectious diseases, and arbitrarily picking a model without any consideration of alternatives is problematic.
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spelling pubmed-45869062015-10-08 Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola Liu, Wendi Tang, Sanyi Xiao, Yanni Comput Math Methods Med Research Article The aim of the present study is to apply simple ODE models in the area of modeling the spread of emerging infectious diseases and show the importance of model selection in estimating parameters, the basic reproduction number, turning point, and final size. To quantify the plausibility of each model, given the data and the set of four models including Logistic, Gompertz, Rosenzweg, and Richards models, the Bayes factors are calculated and the precise estimates of the best fitted model parameters and key epidemic characteristics have been obtained. In particular, for Ebola the basic reproduction numbers are 1.3522 (95% CI (1.3506, 1.3537)), 1.2101 (95% CI (1.2084, 1.2119)), 3.0234 (95% CI (2.6063, 3.4881)), and 1.9018 (95% CI (1.8565, 1.9478)), the turning points are November 7,November 17, October 2, and November 3, 2014, and the final sizes until December 2015 are 25794 (95% CI (25630, 25958)), 3916 (95% CI (3865, 3967)), 9886 (95% CI (9740, 10031)), and 12633 (95% CI (12515, 12750)) for West Africa, Guinea, Liberia, and Sierra Leone, respectively. The main results confirm that model selection is crucial in evaluating and predicting the important quantities describing the emerging infectious diseases, and arbitrarily picking a model without any consideration of alternatives is problematic. Hindawi Publishing Corporation 2015 2015-09-15 /pmc/articles/PMC4586906/ /pubmed/26451161 http://dx.doi.org/10.1155/2015/207105 Text en Copyright © 2015 Wendi Liu et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Liu, Wendi
Tang, Sanyi
Xiao, Yanni
Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title_full Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title_fullStr Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title_full_unstemmed Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title_short Model Selection and Evaluation Based on Emerging Infectious Disease Data Sets including A/H1N1 and Ebola
title_sort model selection and evaluation based on emerging infectious disease data sets including a/h1n1 and ebola
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4586906/
https://www.ncbi.nlm.nih.gov/pubmed/26451161
http://dx.doi.org/10.1155/2015/207105
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