Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool

BACKGROUND: Genome assembly remains an unsolved problem. Assembly projects face a range of hurdles that confound assembly. Thus a variety of tools and approaches are needed to improve draft genomes. RESULTS: We used a custom assembly workflow to optimize consensus genome map assembly, resulting in a...

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Detalles Bibliográficos
Autores principales: Shelton, Jennifer M., Coleman, Michelle C., Herndon, Nic, Lu, Nanyan, Lam, Ernest T., Anantharaman, Thomas, Sheth, Palak, Brown, Susan J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587741/
https://www.ncbi.nlm.nih.gov/pubmed/26416786
http://dx.doi.org/10.1186/s12864-015-1911-8

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587741/
https://www.ncbi.nlm.nih.gov/pubmed/26416786
http://dx.doi.org/10.1186/s12864-015-1911-8

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