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Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1

Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural i...

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Autores principales: Lee, Yong-Jik, Jeong, Haeyoung, Park, Gun-Seok, Kwak, Yunyoung, Lee, Sang-Jae, Lee, Sang Jun, Park, Min-Kyu, Kim, Ji-Yeon, Kang, Hwan Ku, Shin, Jae-Ho, Lee, Dong-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587914/
https://www.ncbi.nlm.nih.gov/pubmed/26421103
http://dx.doi.org/10.1186/s40793-015-0063-4
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author Lee, Yong-Jik
Jeong, Haeyoung
Park, Gun-Seok
Kwak, Yunyoung
Lee, Sang-Jae
Lee, Sang Jun
Park, Min-Kyu
Kim, Ji-Yeon
Kang, Hwan Ku
Shin, Jae-Ho
Lee, Dong-Woo
author_facet Lee, Yong-Jik
Jeong, Haeyoung
Park, Gun-Seok
Kwak, Yunyoung
Lee, Sang-Jae
Lee, Sang Jun
Park, Min-Kyu
Kim, Ji-Yeon
Kang, Hwan Ku
Shin, Jae-Ho
Lee, Dong-Woo
author_sort Lee, Yong-Jik
collection PubMed
description Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural issues in bioremediation and development of eco-friendly bioprocesses for the treatment of native feathers. However, its genomic and phylogenetic analysis remains unclear. Here, we report the high-quality draft genome sequence of an extremely thermophilic anaerobe, F. islandicum AW-1. The genome consists of 2,359,755 bp, which encodes 2,184 protein-coding genes and 64 RNA-encoding genes. This may reveal insights into anaerobic metabolism for keratin degradation and also provide a biological option for poultry waste treatments.
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spelling pubmed-45879142015-09-30 Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 Lee, Yong-Jik Jeong, Haeyoung Park, Gun-Seok Kwak, Yunyoung Lee, Sang-Jae Lee, Sang Jun Park, Min-Kyu Kim, Ji-Yeon Kang, Hwan Ku Shin, Jae-Ho Lee, Dong-Woo Stand Genomic Sci Short Genome Report Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural issues in bioremediation and development of eco-friendly bioprocesses for the treatment of native feathers. However, its genomic and phylogenetic analysis remains unclear. Here, we report the high-quality draft genome sequence of an extremely thermophilic anaerobe, F. islandicum AW-1. The genome consists of 2,359,755 bp, which encodes 2,184 protein-coding genes and 64 RNA-encoding genes. This may reveal insights into anaerobic metabolism for keratin degradation and also provide a biological option for poultry waste treatments. BioMed Central 2015-09-29 /pmc/articles/PMC4587914/ /pubmed/26421103 http://dx.doi.org/10.1186/s40793-015-0063-4 Text en © Lee et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Lee, Yong-Jik
Jeong, Haeyoung
Park, Gun-Seok
Kwak, Yunyoung
Lee, Sang-Jae
Lee, Sang Jun
Park, Min-Kyu
Kim, Ji-Yeon
Kang, Hwan Ku
Shin, Jae-Ho
Lee, Dong-Woo
Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title_full Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title_fullStr Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title_full_unstemmed Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title_short Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
title_sort genome sequence of a native-feather degrading extremely thermophilic eubacterium, fervidobacterium islandicum aw-1
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587914/
https://www.ncbi.nlm.nih.gov/pubmed/26421103
http://dx.doi.org/10.1186/s40793-015-0063-4
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