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Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1
Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural i...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587914/ https://www.ncbi.nlm.nih.gov/pubmed/26421103 http://dx.doi.org/10.1186/s40793-015-0063-4 |
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author | Lee, Yong-Jik Jeong, Haeyoung Park, Gun-Seok Kwak, Yunyoung Lee, Sang-Jae Lee, Sang Jun Park, Min-Kyu Kim, Ji-Yeon Kang, Hwan Ku Shin, Jae-Ho Lee, Dong-Woo |
author_facet | Lee, Yong-Jik Jeong, Haeyoung Park, Gun-Seok Kwak, Yunyoung Lee, Sang-Jae Lee, Sang Jun Park, Min-Kyu Kim, Ji-Yeon Kang, Hwan Ku Shin, Jae-Ho Lee, Dong-Woo |
author_sort | Lee, Yong-Jik |
collection | PubMed |
description | Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural issues in bioremediation and development of eco-friendly bioprocesses for the treatment of native feathers. However, its genomic and phylogenetic analysis remains unclear. Here, we report the high-quality draft genome sequence of an extremely thermophilic anaerobe, F. islandicum AW-1. The genome consists of 2,359,755 bp, which encodes 2,184 protein-coding genes and 64 RNA-encoding genes. This may reveal insights into anaerobic metabolism for keratin degradation and also provide a biological option for poultry waste treatments. |
format | Online Article Text |
id | pubmed-4587914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45879142015-09-30 Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 Lee, Yong-Jik Jeong, Haeyoung Park, Gun-Seok Kwak, Yunyoung Lee, Sang-Jae Lee, Sang Jun Park, Min-Kyu Kim, Ji-Yeon Kang, Hwan Ku Shin, Jae-Ho Lee, Dong-Woo Stand Genomic Sci Short Genome Report Fervidobacterium islandicum AW-1 (KCTC 4680) is an extremely thermophilic anaerobe isolated from a hot spring in Indonesia. This bacterium could degrade native chicken feathers completely at 70 °C within 48 h, which is of potential importance on the basis of relevant environmental and agricultural issues in bioremediation and development of eco-friendly bioprocesses for the treatment of native feathers. However, its genomic and phylogenetic analysis remains unclear. Here, we report the high-quality draft genome sequence of an extremely thermophilic anaerobe, F. islandicum AW-1. The genome consists of 2,359,755 bp, which encodes 2,184 protein-coding genes and 64 RNA-encoding genes. This may reveal insights into anaerobic metabolism for keratin degradation and also provide a biological option for poultry waste treatments. BioMed Central 2015-09-29 /pmc/articles/PMC4587914/ /pubmed/26421103 http://dx.doi.org/10.1186/s40793-015-0063-4 Text en © Lee et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Lee, Yong-Jik Jeong, Haeyoung Park, Gun-Seok Kwak, Yunyoung Lee, Sang-Jae Lee, Sang Jun Park, Min-Kyu Kim, Ji-Yeon Kang, Hwan Ku Shin, Jae-Ho Lee, Dong-Woo Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title | Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title_full | Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title_fullStr | Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title_full_unstemmed | Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title_short | Genome sequence of a native-feather degrading extremely thermophilic Eubacterium, Fervidobacterium islandicum AW-1 |
title_sort | genome sequence of a native-feather degrading extremely thermophilic eubacterium, fervidobacterium islandicum aw-1 |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4587914/ https://www.ncbi.nlm.nih.gov/pubmed/26421103 http://dx.doi.org/10.1186/s40793-015-0063-4 |
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