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Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models
CONTEXT: Mathematical models may help the analysis of biological systems by providing estimates of otherwise un-measurable quantities such as concentrations and fluxes. The variability in such systems makes it difficult to translate individual characteristics to group behavior. Mixed effects models...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589417/ https://www.ncbi.nlm.nih.gov/pubmed/26422201 http://dx.doi.org/10.1371/journal.pone.0138538 |
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author | Berglund, Martin Adiels, Martin Taskinen, Marja-Riitta Borén, Jan Wennberg, Bernt |
author_facet | Berglund, Martin Adiels, Martin Taskinen, Marja-Riitta Borén, Jan Wennberg, Bernt |
author_sort | Berglund, Martin |
collection | PubMed |
description | CONTEXT: Mathematical models may help the analysis of biological systems by providing estimates of otherwise un-measurable quantities such as concentrations and fluxes. The variability in such systems makes it difficult to translate individual characteristics to group behavior. Mixed effects models offer a tool to simultaneously assess individual and population behavior from experimental data. Lipoproteins and plasma lipids are key mediators for cardiovascular disease in metabolic disorders such as diabetes mellitus type 2. By the use of mathematical models and tracer experiments fluxes and production rates of lipoproteins may be estimated. RESULTS: We developed a mixed effects model to study lipoprotein kinetics in a data set of 15 healthy individuals and 15 patients with type 2 diabetes. We compare the traditional and the mixed effects approach in terms of group estimates at various sample and data set sizes. CONCLUSION: We conclude that the mixed effects approach provided better estimates using the full data set as well as with both sparse and truncated data sets. Sample size estimates showed that to compare lipoprotein secretion the mixed effects approach needed almost half the sample size as the traditional method. |
format | Online Article Text |
id | pubmed-4589417 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45894172015-10-02 Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models Berglund, Martin Adiels, Martin Taskinen, Marja-Riitta Borén, Jan Wennberg, Bernt PLoS One Research Article CONTEXT: Mathematical models may help the analysis of biological systems by providing estimates of otherwise un-measurable quantities such as concentrations and fluxes. The variability in such systems makes it difficult to translate individual characteristics to group behavior. Mixed effects models offer a tool to simultaneously assess individual and population behavior from experimental data. Lipoproteins and plasma lipids are key mediators for cardiovascular disease in metabolic disorders such as diabetes mellitus type 2. By the use of mathematical models and tracer experiments fluxes and production rates of lipoproteins may be estimated. RESULTS: We developed a mixed effects model to study lipoprotein kinetics in a data set of 15 healthy individuals and 15 patients with type 2 diabetes. We compare the traditional and the mixed effects approach in terms of group estimates at various sample and data set sizes. CONCLUSION: We conclude that the mixed effects approach provided better estimates using the full data set as well as with both sparse and truncated data sets. Sample size estimates showed that to compare lipoprotein secretion the mixed effects approach needed almost half the sample size as the traditional method. Public Library of Science 2015-09-30 /pmc/articles/PMC4589417/ /pubmed/26422201 http://dx.doi.org/10.1371/journal.pone.0138538 Text en © 2015 Berglund et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Berglund, Martin Adiels, Martin Taskinen, Marja-Riitta Borén, Jan Wennberg, Bernt Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title | Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title_full | Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title_fullStr | Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title_full_unstemmed | Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title_short | Improved Estimation of Human Lipoprotein Kinetics with Mixed Effects Models |
title_sort | improved estimation of human lipoprotein kinetics with mixed effects models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589417/ https://www.ncbi.nlm.nih.gov/pubmed/26422201 http://dx.doi.org/10.1371/journal.pone.0138538 |
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