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MGDB: a comprehensive database of genes involved in melanoma
The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries descr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589692/ https://www.ncbi.nlm.nih.gov/pubmed/26424083 http://dx.doi.org/10.1093/database/bav097 |
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author | Zhang, Di Zhu, Rongrong Zhang, Hanqian Zheng, Chun-Hou Xia, Junfeng |
author_facet | Zhang, Di Zhu, Rongrong Zhang, Hanqian Zheng, Chun-Hou Xia, Junfeng |
author_sort | Zhang, Di |
collection | PubMed |
description | The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries describing the relationships between melanoma and genes in the current release were manually extracted from PubMed abstracts, which contains cumulative to date 527 human melanoma genes (422 protein-coding and 105 non-coding genes). Each melanoma gene was annotated in seven different aspects (General Information, Expression, Methylation, Mutation, Interaction, Pathway and Drug). In addition, manually curated literature references have also been provided to support the inclusion of the gene in MGDB and establish its association with melanoma. MGDB has a user-friendly web interface with multiple browse and search functions. We hoped MGDB will enrich our knowledge about melanoma genetics and serve as a useful complement to the existing public resources. Database URL: http://bioinfo.ahu.edu.cn:8080/Melanoma/index.jsp |
format | Online Article Text |
id | pubmed-4589692 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-45896922015-10-01 MGDB: a comprehensive database of genes involved in melanoma Zhang, Di Zhu, Rongrong Zhang, Hanqian Zheng, Chun-Hou Xia, Junfeng Database (Oxford) Original Article The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries describing the relationships between melanoma and genes in the current release were manually extracted from PubMed abstracts, which contains cumulative to date 527 human melanoma genes (422 protein-coding and 105 non-coding genes). Each melanoma gene was annotated in seven different aspects (General Information, Expression, Methylation, Mutation, Interaction, Pathway and Drug). In addition, manually curated literature references have also been provided to support the inclusion of the gene in MGDB and establish its association with melanoma. MGDB has a user-friendly web interface with multiple browse and search functions. We hoped MGDB will enrich our knowledge about melanoma genetics and serve as a useful complement to the existing public resources. Database URL: http://bioinfo.ahu.edu.cn:8080/Melanoma/index.jsp Oxford University Press 2015-09-30 /pmc/articles/PMC4589692/ /pubmed/26424083 http://dx.doi.org/10.1093/database/bav097 Text en © The Author(s) 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Zhang, Di Zhu, Rongrong Zhang, Hanqian Zheng, Chun-Hou Xia, Junfeng MGDB: a comprehensive database of genes involved in melanoma |
title | MGDB: a comprehensive database of genes involved in melanoma |
title_full | MGDB: a comprehensive database of genes involved in melanoma |
title_fullStr | MGDB: a comprehensive database of genes involved in melanoma |
title_full_unstemmed | MGDB: a comprehensive database of genes involved in melanoma |
title_short | MGDB: a comprehensive database of genes involved in melanoma |
title_sort | mgdb: a comprehensive database of genes involved in melanoma |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589692/ https://www.ncbi.nlm.nih.gov/pubmed/26424083 http://dx.doi.org/10.1093/database/bav097 |
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