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MGDB: a comprehensive database of genes involved in melanoma

The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries descr...

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Detalles Bibliográficos
Autores principales: Zhang, Di, Zhu, Rongrong, Zhang, Hanqian, Zheng, Chun-Hou, Xia, Junfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589692/
https://www.ncbi.nlm.nih.gov/pubmed/26424083
http://dx.doi.org/10.1093/database/bav097
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author Zhang, Di
Zhu, Rongrong
Zhang, Hanqian
Zheng, Chun-Hou
Xia, Junfeng
author_facet Zhang, Di
Zhu, Rongrong
Zhang, Hanqian
Zheng, Chun-Hou
Xia, Junfeng
author_sort Zhang, Di
collection PubMed
description The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries describing the relationships between melanoma and genes in the current release were manually extracted from PubMed abstracts, which contains cumulative to date 527 human melanoma genes (422 protein-coding and 105 non-coding genes). Each melanoma gene was annotated in seven different aspects (General Information, Expression, Methylation, Mutation, Interaction, Pathway and Drug). In addition, manually curated literature references have also been provided to support the inclusion of the gene in MGDB and establish its association with melanoma. MGDB has a user-friendly web interface with multiple browse and search functions. We hoped MGDB will enrich our knowledge about melanoma genetics and serve as a useful complement to the existing public resources. Database URL: http://bioinfo.ahu.edu.cn:8080/Melanoma/index.jsp
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spelling pubmed-45896922015-10-01 MGDB: a comprehensive database of genes involved in melanoma Zhang, Di Zhu, Rongrong Zhang, Hanqian Zheng, Chun-Hou Xia, Junfeng Database (Oxford) Original Article The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries describing the relationships between melanoma and genes in the current release were manually extracted from PubMed abstracts, which contains cumulative to date 527 human melanoma genes (422 protein-coding and 105 non-coding genes). Each melanoma gene was annotated in seven different aspects (General Information, Expression, Methylation, Mutation, Interaction, Pathway and Drug). In addition, manually curated literature references have also been provided to support the inclusion of the gene in MGDB and establish its association with melanoma. MGDB has a user-friendly web interface with multiple browse and search functions. We hoped MGDB will enrich our knowledge about melanoma genetics and serve as a useful complement to the existing public resources. Database URL: http://bioinfo.ahu.edu.cn:8080/Melanoma/index.jsp Oxford University Press 2015-09-30 /pmc/articles/PMC4589692/ /pubmed/26424083 http://dx.doi.org/10.1093/database/bav097 Text en © The Author(s) 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Zhang, Di
Zhu, Rongrong
Zhang, Hanqian
Zheng, Chun-Hou
Xia, Junfeng
MGDB: a comprehensive database of genes involved in melanoma
title MGDB: a comprehensive database of genes involved in melanoma
title_full MGDB: a comprehensive database of genes involved in melanoma
title_fullStr MGDB: a comprehensive database of genes involved in melanoma
title_full_unstemmed MGDB: a comprehensive database of genes involved in melanoma
title_short MGDB: a comprehensive database of genes involved in melanoma
title_sort mgdb: a comprehensive database of genes involved in melanoma
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4589692/
https://www.ncbi.nlm.nih.gov/pubmed/26424083
http://dx.doi.org/10.1093/database/bav097
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