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Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia

The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci as...

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Autores principales: Son, Ho-Young, Sohn, Seong-Wook, Im, Sun-Hwa, Kim, Hyun-Jin, Lee, Mi Kyeong, Gombojav, Bayasgalan, Kwon, Hyouk-Soo, Park, Daniel S., Kim, Hyung-Lae, Min, Kyung-Up, Sung, Joohon, Seo, Jeong-Sun, Kim, Jong-Il
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592257/
https://www.ncbi.nlm.nih.gov/pubmed/26430897
http://dx.doi.org/10.1371/journal.pone.0139716
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author Son, Ho-Young
Sohn, Seong-Wook
Im, Sun-Hwa
Kim, Hyun-Jin
Lee, Mi Kyeong
Gombojav, Bayasgalan
Kwon, Hyouk-Soo
Park, Daniel S.
Kim, Hyung-Lae
Min, Kyung-Up
Sung, Joohon
Seo, Jeong-Sun
Kim, Jong-Il
author_facet Son, Ho-Young
Sohn, Seong-Wook
Im, Sun-Hwa
Kim, Hyun-Jin
Lee, Mi Kyeong
Gombojav, Bayasgalan
Kwon, Hyouk-Soo
Park, Daniel S.
Kim, Hyung-Lae
Min, Kyung-Up
Sung, Joohon
Seo, Jeong-Sun
Kim, Jong-Il
author_sort Son, Ho-Young
collection PubMed
description The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci associated with pulmonary function. However, limited numbers of studies have been reported for Asian populations. In this study, we aimed to investigate genetic evidence of pulmonary function in a population in northeast Asia. We conducted a family-based association test with 706 GENDISCAN study participants from 72 Mongolian families to determine candidate genetic determinants of pulmonary function. For the replication, we chose seven candidate single nucleotide polymorphisms (SNPs) from the 5 loci, and tested 1062 SNPs for association with FEV(1) from 2,729 subjects of the Korea Healthy Twin study. We identified TMEM132C as a potential candidate gene at 12q24.3, which is a previously reported locus of asthma and spirometric indices. We also found two adjacent candidate genes (UNC93A and TTLL2) in the 6q27 region, which has been previously identified as a pulmonary function locus in the Framingham cohort study. Our findings suggest that novel candidate genes (TMEM132C, UNC93A and TTLL2) in two different regions are associated with pulmonary function in a population in northeast Asia.
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spelling pubmed-45922572015-10-09 Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia Son, Ho-Young Sohn, Seong-Wook Im, Sun-Hwa Kim, Hyun-Jin Lee, Mi Kyeong Gombojav, Bayasgalan Kwon, Hyouk-Soo Park, Daniel S. Kim, Hyung-Lae Min, Kyung-Up Sung, Joohon Seo, Jeong-Sun Kim, Jong-Il PLoS One Research Article The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci associated with pulmonary function. However, limited numbers of studies have been reported for Asian populations. In this study, we aimed to investigate genetic evidence of pulmonary function in a population in northeast Asia. We conducted a family-based association test with 706 GENDISCAN study participants from 72 Mongolian families to determine candidate genetic determinants of pulmonary function. For the replication, we chose seven candidate single nucleotide polymorphisms (SNPs) from the 5 loci, and tested 1062 SNPs for association with FEV(1) from 2,729 subjects of the Korea Healthy Twin study. We identified TMEM132C as a potential candidate gene at 12q24.3, which is a previously reported locus of asthma and spirometric indices. We also found two adjacent candidate genes (UNC93A and TTLL2) in the 6q27 region, which has been previously identified as a pulmonary function locus in the Framingham cohort study. Our findings suggest that novel candidate genes (TMEM132C, UNC93A and TTLL2) in two different regions are associated with pulmonary function in a population in northeast Asia. Public Library of Science 2015-10-02 /pmc/articles/PMC4592257/ /pubmed/26430897 http://dx.doi.org/10.1371/journal.pone.0139716 Text en © 2015 Son et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Son, Ho-Young
Sohn, Seong-Wook
Im, Sun-Hwa
Kim, Hyun-Jin
Lee, Mi Kyeong
Gombojav, Bayasgalan
Kwon, Hyouk-Soo
Park, Daniel S.
Kim, Hyung-Lae
Min, Kyung-Up
Sung, Joohon
Seo, Jeong-Sun
Kim, Jong-Il
Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title_full Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title_fullStr Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title_full_unstemmed Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title_short Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
title_sort family-based association study of pulmonary function in a population in northeast asia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592257/
https://www.ncbi.nlm.nih.gov/pubmed/26430897
http://dx.doi.org/10.1371/journal.pone.0139716
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