Cargando…
Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia
The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci as...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592257/ https://www.ncbi.nlm.nih.gov/pubmed/26430897 http://dx.doi.org/10.1371/journal.pone.0139716 |
_version_ | 1782393188702486528 |
---|---|
author | Son, Ho-Young Sohn, Seong-Wook Im, Sun-Hwa Kim, Hyun-Jin Lee, Mi Kyeong Gombojav, Bayasgalan Kwon, Hyouk-Soo Park, Daniel S. Kim, Hyung-Lae Min, Kyung-Up Sung, Joohon Seo, Jeong-Sun Kim, Jong-Il |
author_facet | Son, Ho-Young Sohn, Seong-Wook Im, Sun-Hwa Kim, Hyun-Jin Lee, Mi Kyeong Gombojav, Bayasgalan Kwon, Hyouk-Soo Park, Daniel S. Kim, Hyung-Lae Min, Kyung-Up Sung, Joohon Seo, Jeong-Sun Kim, Jong-Il |
author_sort | Son, Ho-Young |
collection | PubMed |
description | The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci associated with pulmonary function. However, limited numbers of studies have been reported for Asian populations. In this study, we aimed to investigate genetic evidence of pulmonary function in a population in northeast Asia. We conducted a family-based association test with 706 GENDISCAN study participants from 72 Mongolian families to determine candidate genetic determinants of pulmonary function. For the replication, we chose seven candidate single nucleotide polymorphisms (SNPs) from the 5 loci, and tested 1062 SNPs for association with FEV(1) from 2,729 subjects of the Korea Healthy Twin study. We identified TMEM132C as a potential candidate gene at 12q24.3, which is a previously reported locus of asthma and spirometric indices. We also found two adjacent candidate genes (UNC93A and TTLL2) in the 6q27 region, which has been previously identified as a pulmonary function locus in the Framingham cohort study. Our findings suggest that novel candidate genes (TMEM132C, UNC93A and TTLL2) in two different regions are associated with pulmonary function in a population in northeast Asia. |
format | Online Article Text |
id | pubmed-4592257 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-45922572015-10-09 Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia Son, Ho-Young Sohn, Seong-Wook Im, Sun-Hwa Kim, Hyun-Jin Lee, Mi Kyeong Gombojav, Bayasgalan Kwon, Hyouk-Soo Park, Daniel S. Kim, Hyung-Lae Min, Kyung-Up Sung, Joohon Seo, Jeong-Sun Kim, Jong-Il PLoS One Research Article The spirometric measurement of pulmonary function by measuring the forced expiratory volume in one second (FEV(1)) is a heritable trait that reflects the physiological condition of the lung and airways. Genome-wide linkage and association studies have identified a number of genes and genetic loci associated with pulmonary function. However, limited numbers of studies have been reported for Asian populations. In this study, we aimed to investigate genetic evidence of pulmonary function in a population in northeast Asia. We conducted a family-based association test with 706 GENDISCAN study participants from 72 Mongolian families to determine candidate genetic determinants of pulmonary function. For the replication, we chose seven candidate single nucleotide polymorphisms (SNPs) from the 5 loci, and tested 1062 SNPs for association with FEV(1) from 2,729 subjects of the Korea Healthy Twin study. We identified TMEM132C as a potential candidate gene at 12q24.3, which is a previously reported locus of asthma and spirometric indices. We also found two adjacent candidate genes (UNC93A and TTLL2) in the 6q27 region, which has been previously identified as a pulmonary function locus in the Framingham cohort study. Our findings suggest that novel candidate genes (TMEM132C, UNC93A and TTLL2) in two different regions are associated with pulmonary function in a population in northeast Asia. Public Library of Science 2015-10-02 /pmc/articles/PMC4592257/ /pubmed/26430897 http://dx.doi.org/10.1371/journal.pone.0139716 Text en © 2015 Son et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Son, Ho-Young Sohn, Seong-Wook Im, Sun-Hwa Kim, Hyun-Jin Lee, Mi Kyeong Gombojav, Bayasgalan Kwon, Hyouk-Soo Park, Daniel S. Kim, Hyung-Lae Min, Kyung-Up Sung, Joohon Seo, Jeong-Sun Kim, Jong-Il Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title | Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title_full | Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title_fullStr | Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title_full_unstemmed | Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title_short | Family-Based Association Study of Pulmonary Function in a Population in Northeast Asia |
title_sort | family-based association study of pulmonary function in a population in northeast asia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592257/ https://www.ncbi.nlm.nih.gov/pubmed/26430897 http://dx.doi.org/10.1371/journal.pone.0139716 |
work_keys_str_mv | AT sonhoyoung familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT sohnseongwook familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT imsunhwa familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT kimhyunjin familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT leemikyeong familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT gombojavbayasgalan familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT kwonhyouksoo familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT parkdaniels familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT kimhyunglae familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT minkyungup familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT sungjoohon familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT seojeongsun familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia AT kimjongil familybasedassociationstudyofpulmonaryfunctioninapopulationinnortheastasia |