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Glycoside hydrolase family 32 is present in Bacillus subtilis phages
BACKGROUND: Glycoside hydrolase family 32 (GH32) enzymes cleave the glycosidic bond between two monosaccharides or between a carbohydrate and an aglycone moiety. GH32 enzymes have been studied in prokaryotes and in eukaryotes but not in viruses. FINDINGS: This is the first analysis of GH32 enzymes i...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4595243/ https://www.ncbi.nlm.nih.gov/pubmed/26438422 http://dx.doi.org/10.1186/s12985-015-0373-6 |
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author | Maaroufi, Halim Levesque, Roger C. |
author_facet | Maaroufi, Halim Levesque, Roger C. |
author_sort | Maaroufi, Halim |
collection | PubMed |
description | BACKGROUND: Glycoside hydrolase family 32 (GH32) enzymes cleave the glycosidic bond between two monosaccharides or between a carbohydrate and an aglycone moiety. GH32 enzymes have been studied in prokaryotes and in eukaryotes but not in viruses. FINDINGS: This is the first analysis of GH32 enzymes in Bacillus subtilis phage SP10, ϕNIT1 and SPG24. Phylogenetic analysis, molecular docking and secretability predictions suggest that phage GH32 enzymes function as levan (fructose homopolysaccharide) fructotransferase. CONCLUSIONS: We showed that viruses also contain GH32 enzymes and that our analyses in silico strongly suggest that these enzymes function as levan fructotransferase. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-015-0373-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4595243 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-45952432015-10-07 Glycoside hydrolase family 32 is present in Bacillus subtilis phages Maaroufi, Halim Levesque, Roger C. Virol J Short Report BACKGROUND: Glycoside hydrolase family 32 (GH32) enzymes cleave the glycosidic bond between two monosaccharides or between a carbohydrate and an aglycone moiety. GH32 enzymes have been studied in prokaryotes and in eukaryotes but not in viruses. FINDINGS: This is the first analysis of GH32 enzymes in Bacillus subtilis phage SP10, ϕNIT1 and SPG24. Phylogenetic analysis, molecular docking and secretability predictions suggest that phage GH32 enzymes function as levan (fructose homopolysaccharide) fructotransferase. CONCLUSIONS: We showed that viruses also contain GH32 enzymes and that our analyses in silico strongly suggest that these enzymes function as levan fructotransferase. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12985-015-0373-6) contains supplementary material, which is available to authorized users. BioMed Central 2015-10-06 /pmc/articles/PMC4595243/ /pubmed/26438422 http://dx.doi.org/10.1186/s12985-015-0373-6 Text en © Maaroufi and Levesque. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Report Maaroufi, Halim Levesque, Roger C. Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title | Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title_full | Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title_fullStr | Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title_full_unstemmed | Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title_short | Glycoside hydrolase family 32 is present in Bacillus subtilis phages |
title_sort | glycoside hydrolase family 32 is present in bacillus subtilis phages |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4595243/ https://www.ncbi.nlm.nih.gov/pubmed/26438422 http://dx.doi.org/10.1186/s12985-015-0373-6 |
work_keys_str_mv | AT maaroufihalim glycosidehydrolasefamily32ispresentinbacillussubtilisphages AT levesquerogerc glycosidehydrolasefamily32ispresentinbacillussubtilisphages |