Cargando…

Analysis of three genomes within the thermophilic bacterial species Caldanaerobacter subterraneus with a focus on carbon monoxide dehydrogenase evolution and hydrolase diversity

BACKGROUND: The Caldanaerobacter subterraneus species includes thermophilic fermentative bacteria able to grow on carbohydrates substrates with acetate and L-alanine as the main products. In this study, comprehensive analysis of three genomes of C. subterraneus subspecies was carried in order to ide...

Descripción completa

Detalles Bibliográficos
Autores principales:	Sant’Anna, FH, Lebedinsky, AV, Sokolova, TG, Robb, FT, Gonzalez, JM
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4596419/ https://www.ncbi.nlm.nih.gov/pubmed/26446804 http://dx.doi.org/10.1186/s12864-015-1955-9

Ejemplares similares

Thermostable lipases from the extreme thermophilic anaerobic bacteria Thermoanaerobacter thermohydrosulfuricus SOL1 and Caldanaerobacter subterraneus subsp. tengcongensis
por: Royter, Marina, et al.
Publicado: (2009)

Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
por: Sasamoto, Kohei, et al.
Publicado: (2022)

Evidence for Horizontal Gene Transfer of Anaerobic Carbon Monoxide Dehydrogenases
por: Techtmann, Stephen M., et al.
Publicado: (2012)

Draft Genome Sequence of Geobacillus subterraneus Strain K, a Hydrocarbon-Oxidizing Thermophilic Bacterium Isolated from a Petroleum Reservoir in Kazakhstan
por: Poltaraus, Andrey B., et al.
Publicado: (2016)

Data on draft genome sequence of Caldanaerobacter sp. strain 1523vc, a thermophilic bacterium, isolated from a hot spring of Uzon Caldera, (Kamchatka, Russia)
por: Korzhenkov, A.A., et al.
Publicado: (2020)

Diversity analysis of thermophilic hydrogenogenic carboxydotrophs by carbon monoxide dehydrogenase amplicon sequencing using new primers
por: Omae, Kimiho, et al.
Publicado: (2021)

Draft genome sequence of Thermovorax subterraneus 70B(T), a thermophile isolated from a geothermally active underground mine that produces hydrogen
por: Goh, Kian Mau, et al.
Publicado: (2022)

Discovery and rational engineering of PET hydrolase with both mesophilic and thermophilic PET hydrolase properties
por: Hong, Hwaseok, et al.
Publicado: (2023)

The complete mitochondrial genome of the common pine vole Terricola subterraneus (Arvicolinae, Rodentia)
por: Bondareva, Olga V., et al.
Publicado: (2019)

Draft Genome Sequence of an Anaerobic and Extremophilic Bacterium, Caldanaerobacter yonseiensis, Isolated from a Geothermal Hot Stream
por: Lee, Sang-Jae, et al.
Publicado: (2013)

Distribution and diversity of anaerobic thermophiles and putative anaerobic nickel-dependent carbon monoxide-oxidizing thermophiles in mesothermal soils and sediments
por: DePoy, Amber N., et al.
Publicado: (2023)

Whole-genome sequence data and analysis of type strains ‘Pusillimonas nitritireducens’ and ‘Pusillimonas subterraneus’ isolated from nitrate- and radionuclide-contaminated groundwater in Russia
por: Grouzdev, Denis S., et al.
Publicado: (2018)

Hygienic Behavior, Liquid-Foraging, and Trophallaxis in the Leaf-Cutting Ants, Acromyrmex subterraneus and Acromyrmex octospinosus
por: Richard, Freddie-Jeanne, et al.
Publicado: (2009)

Asperosporus subterraneus, a new genus and species of sequestrate Agaricaceae found in Florida nursery production
por: Karlsen-Ayala, E., et al.
Publicado: (2021)

Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase
por: Pfaff, Lara, et al.
Publicado: (2022)

Deep Conversion of Carbon Monoxide to Hydrogen and Formation of Acetate by the Anaerobic Thermophile Carboxydothermus hydrogenoformans
por: Henstra, Anne M., et al.
Publicado: (2011)

Structural and Phylogenetic Diversity of Anaerobic Carbon-Monoxide Dehydrogenases
por: Inoue, Masao, et al.
Publicado: (2019)

High Rate Biomethanation of Carbon Monoxide-Rich Gases via a Thermophilic Synthetic Coculture
por: Diender, Martijn, et al.
Publicado: (2017)

Bioprospecting thermophilic glycosyl hydrolases, from hot springs of Himachal Pradesh, for biomass valorization
por: Thankappan, Sugitha, et al.
Publicado: (2018)

Genomes of Geoalkalibacter ferrihydriticus Z-0531(T) and Geoalkalibacter subterraneus Red1(T), Two Haloalkaliphilic Metal-Reducing Deltaproteobacteria
por: Badalamenti, Jonathan P., et al.
Publicado: (2015)

Biome-specific distribution of Ni-containing carbon monoxide dehydrogenases
por: Inoue, Masao, et al.
Publicado: (2022)

Visualizing the gas channel of a monofunctional carbon monoxide dehydrogenase
por: Biester, Alison, et al.
Publicado: (2022)

Carbon monoxide-dependent transcriptional changes in a thermophilic, carbon monoxide-utilizing, hydrogen-evolving bacterium Calderihabitans maritimus KKC1 revealed by transcriptomic analysis
por: Inoue, Masao, et al.
Publicado: (2020)

Insight into Glycoside Hydrolases for Debranched Xylan Degradation from Extremely Thermophilic Bacterium Caldicellulosiruptor lactoaceticus
por: Jia, Xiaojing, et al.
Publicado: (2014)

New Thermophilic α/β Class Epoxide Hydrolases Found in Metagenomes From Hot Environments
por: Ferrandi, Erica Elisa, et al.
Publicado: (2018)

Illumina Short-Read Sequencing of the Mitogenomes of Novel Scarites subterraneus Isolates Allows for Taxonomic Refinement of the Genus Scarites Fabricius 1775, within the Carabidae Family
por: Kyndt, Elliot C., et al.
Publicado: (2022)

Redox-dependent rearrangements of the NiFeS cluster of carbon monoxide dehydrogenase
por: Wittenborn, Elizabeth C, et al.
Publicado: (2018)

Draft Genome Sequences of Supercritical CO(2)-Tolerant Bacteria Bacillus subterraneus MITOT1 and Bacillus cereus MIT0214
por: Peet, Kyle C., et al.
Publicado: (2015)

Effect of Sulfate on Carbon Monoxide Conversion by a Thermophilic Syngas-Fermenting Culture Dominated by a Desulfofundulus Species
por: Alves, Joana I., et al.
Publicado: (2020)

Perchlorate-Coupled Carbon Monoxide (CO) Oxidation by Moorella glycerini, an Obligately Anaerobic, Thermophilic, Nickel-Dependent Carboxydotroph
por: Myers, Marisa R., et al.
Publicado: (2023)

Comparative analysis of amino acid sequences from mesophiles and thermophiles in respective of carbon–nitrogen hydrolase family
por: Devi, Sarita, et al.
Publicado: (2013)

A multifunctional thermophilic glycoside hydrolase from Caldicellulosiruptor owensensis with potential applications in production of biofuels and biochemicals
por: Peng, Xiaowei, et al.
Publicado: (2016)

Valorization of Biomasses from Energy Crops for the Discovery of Novel Thermophilic Glycoside Hydrolases through Metagenomic Analysis
por: Iacono, Roberta, et al.
Publicado: (2022)

Complete Genome Sequence of the Hyperthermophilic and Piezophilic Archaeon Thermococcus barophilus Ch5, Capable of Growth at the Expense of Hydrogenogenesis from Carbon Monoxide and Formate
por: Oger, Philippe, et al.
Publicado: (2016)

Interface Matters: The Stiffness Route to Stability of a Thermophilic Tetrameric Malate Dehydrogenase
por: Kalimeri, Maria, et al.
Publicado: (2014)

Life on the fringe: microbial adaptation to growth on carbon monoxide
por: Robb, Frank T., et al.
Publicado: (2018)

A Morphing [4Fe‐3S‐nO]‐Cluster within a Carbon Monoxide Dehydrogenase Scaffold
por: Jeoung, Jae‐Hun, et al.
Publicado: (2022)

Maturation of the [Ni–4Fe–4S] active site of carbon monoxide dehydrogenases
por: Merrouch, Mériem, et al.
Publicado: (2018)

The monofunctional CO dehydrogenase CooS is essential for growth of Thermoanaerobacter kivui on carbon monoxide
por: Jain, Surbhi, et al.
Publicado: (2021)

Metagenomics of Thermophiles with a Focus on Discovery of Novel Thermozymes
por: DeCastro, María-Eugenia, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_4jpp2uuliks56dn9a96blkruc6