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Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks

Robustness, defined as tolerance to perturbations such as mutations and environmental fluctuations, is pervasive in biological systems. However, robustness often coexists with its counterpart, evolvability—the ability of perturbations to generate new phenotypes. Previous models of gene regulatory ne...

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Detalles Bibliográficos
Autores principales: Shin, Jeewoen, MacCarthy, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4599961/
https://www.ncbi.nlm.nih.gov/pubmed/26451700
http://dx.doi.org/10.1371/journal.pcbi.1004432
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author Shin, Jeewoen
MacCarthy, Thomas
author_facet Shin, Jeewoen
MacCarthy, Thomas
author_sort Shin, Jeewoen
collection PubMed
description Robustness, defined as tolerance to perturbations such as mutations and environmental fluctuations, is pervasive in biological systems. However, robustness often coexists with its counterpart, evolvability—the ability of perturbations to generate new phenotypes. Previous models of gene regulatory network evolution have shown that robustness evolves under stabilizing selection, but it is unclear how robustness and evolvability will emerge in common coevolutionary scenarios. We consider a two-species model of coevolution involving one host and one parasite population. By using two interacting species, key model parameters that determine the fitness landscapes become emergent properties of the model, avoiding the need to impose these parameters externally. In our study, parasites are modeled on species such as cuckoos where mimicry of the host phenotype confers high fitness to the parasite but lower fitness to the host. Here, frequent phenotype changes are favored as each population continually adapts to the other population. Sensitivity evolves at the network level such that point mutations can induce large phenotype changes. Crucially, the sensitive points of the network are broadly distributed throughout the network and continually relocate. Each time sensitive points in the network are mutated, new ones appear to take their place. We have therefore named this phenomenon “whack-a-mole” sensitivity, after a popular fun park game. We predict that this type of sensitivity will evolve under conditions of strong directional selection, an observation that helps interpret existing experimental evidence, for example, during the emergence of bacterial antibiotic resistance.
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spelling pubmed-45999612015-10-20 Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks Shin, Jeewoen MacCarthy, Thomas PLoS Comput Biol Research Article Robustness, defined as tolerance to perturbations such as mutations and environmental fluctuations, is pervasive in biological systems. However, robustness often coexists with its counterpart, evolvability—the ability of perturbations to generate new phenotypes. Previous models of gene regulatory network evolution have shown that robustness evolves under stabilizing selection, but it is unclear how robustness and evolvability will emerge in common coevolutionary scenarios. We consider a two-species model of coevolution involving one host and one parasite population. By using two interacting species, key model parameters that determine the fitness landscapes become emergent properties of the model, avoiding the need to impose these parameters externally. In our study, parasites are modeled on species such as cuckoos where mimicry of the host phenotype confers high fitness to the parasite but lower fitness to the host. Here, frequent phenotype changes are favored as each population continually adapts to the other population. Sensitivity evolves at the network level such that point mutations can induce large phenotype changes. Crucially, the sensitive points of the network are broadly distributed throughout the network and continually relocate. Each time sensitive points in the network are mutated, new ones appear to take their place. We have therefore named this phenomenon “whack-a-mole” sensitivity, after a popular fun park game. We predict that this type of sensitivity will evolve under conditions of strong directional selection, an observation that helps interpret existing experimental evidence, for example, during the emergence of bacterial antibiotic resistance. Public Library of Science 2015-10-09 /pmc/articles/PMC4599961/ /pubmed/26451700 http://dx.doi.org/10.1371/journal.pcbi.1004432 Text en © 2015 Shin, MacCarthy http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Shin, Jeewoen
MacCarthy, Thomas
Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title_full Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title_fullStr Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title_full_unstemmed Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title_short Antagonistic Coevolution Drives Whack-a-Mole Sensitivity in Gene Regulatory Networks
title_sort antagonistic coevolution drives whack-a-mole sensitivity in gene regulatory networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4599961/
https://www.ncbi.nlm.nih.gov/pubmed/26451700
http://dx.doi.org/10.1371/journal.pcbi.1004432
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