Cargando…

A novel atlas of gene expression in human skeletal muscle reveals molecular changes associated with aging

BACKGROUND: Although high-throughput studies of gene expression have generated large amounts of data, most of which is freely available in public archives, the use of this valuable resource is limited by computational complications and non-homogenous annotation. To address these issues, we have perf...

Descripción completa

Detalles Bibliográficos
Autores principales:	Su, Jing, Ekman, Carl, Oskolkov, Nikolay, Lahti, Leo, Ström, Kristoffer, Brazma, Alvis, Groop, Leif, Rung, Johan, Hansson, Ola
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4600214/ https://www.ncbi.nlm.nih.gov/pubmed/26457177 http://dx.doi.org/10.1186/s13395-015-0059-1

Ejemplares similares

MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle
por: Asplund, Olof, et al.
Publicado: (2020)

A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases
por: Lahti, Leo, et al.
Publicado: (2013)

Relationship between insulin sensitivity and gene expression in human skeletal muscle
por: Parikh, Hemang M., et al.
Publicado: (2021)

N(1)-methylnicotinamide is a signalling molecule produced in skeletal muscle coordinating energy metabolism
por: Ström, Kristoffer, et al.
Publicado: (2018)

Transcriptome analysis of human tissues and cell lines reveals one dominant transcript per gene
por: Gonzàlez-Porta, Mar, et al.
Publicado: (2013)

Expression of Phosphofructokinase in Skeletal Muscle Is Influenced by Genetic Variation and Associated With Insulin Sensitivity
por: Keildson, Sarah, et al.
Publicado: (2014)

Large scale comparison of global gene expression patterns in human and mouse
por: Zheng-Bradley, Xiangqun, et al.
Publicado: (2010)

Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression
por: Torrente, Aurora, et al.
Publicado: (2016)

TCF7L2 is a master regulator of insulin production and processing
por: Zhou, Yuedan, et al.
Publicado: (2014)

Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
por: Greger, Liliana, et al.
Publicado: (2014)

High-throughput muscle fiber typing from RNA sequencing data
por: Oskolkov, Nikolay, et al.
Publicado: (2022)

Low-cost exercise interventions improve long-term cardiometabolic health independently of a family history of type 2 diabetes: a randomized parallel group trial
por: Wasenius, Niko S, et al.
Publicado: (2020)

Minimum Information About a Microarray Experiment (MIAME) – Successes, Failures, Challenges
por: Brazma, Alvis
Publicado: (2009)

Myocardin Family Members Drive Formation of Caveolae
por: Krawczyk, Katarzyna K., et al.
Publicado: (2015)

Turning Vice into Virtue: Using Batch-Effects to Detect Errors in Large Genomic Data Sets
por: Mafessoni, Fabrizio, et al.
Publicado: (2018)

Learning About Gene Regulatory Networks From Gene Deletion Experiments
por: Schlitt, Thomas, et al.
Publicado: (2002)

Current approaches to gene regulatory network modelling
por: Schlitt, Thomas, et al.
Publicado: (2007)

Visualization of large microarray experiments with space maps
por: Gehlenborg, Nils, et al.
Publicado: (2009)

clustComp, a bioconductor package for the comparison of clustering results
por: Torrente, Aurora, et al.
Publicado: (2017)

Impaired Mitochondrial Function and Insulin Resistance of Skeletal Muscle in Mitochondrial Diabetes
por: Szendroedi, Julia, et al.
Publicado: (2009)

SAIL—a software system for sample and phenotype availability across biobanks and cohorts
por: Gostev, Mikhail, et al.
Publicado: (2011)

Atlas of skeletal muscle pathology /
por: Anderson, Janice R.
Publicado: (1985)

Regulation and Function of FTO mRNA Expression in Human Skeletal Muscle and Subcutaneous Adipose Tissue
por: Grunnet, Louise G., et al.
Publicado: (2009)

Impact of an Exercise Intervention on DNA Methylation in Skeletal Muscle From First-Degree Relatives of Patients With Type 2 Diabetes
por: Nitert, Marloes Dekker, et al.
Publicado: (2012)

New Insights into Impaired Muscle Glycogen Synthesis: More a Problem of Muscle Contractility Than of Glucose Tolerance
por: Groop, Leif, et al.
Publicado: (2008)

Genetic Variation in ATP5O Is Associated with Skeletal Muscle ATP50 mRNA Expression and Glucose Uptake in Young Twins
por: Rönn, Tina, et al.
Publicado: (2009)

Gene Expression Atlas at the European Bioinformatics Institute
por: Kapushesky, Misha, et al.
Publicado: (2010)

RNA-Seq Gene Profiling - A Systematic Empirical Comparison
por: Fonseca, Nuno A., et al.
Publicado: (2014)

The BioStudies database
por: McEntyre, Jo, et al.
Publicado: (2015)

A comprehensive epigenome atlas reveals DNA methylation regulating skeletal muscle development
por: Yang, Yalan, et al.
Publicado: (2021)

Repetitive transcranial magnetic stimulation in major depression: A three-arm parallel-group dose-response randomized pilot trial
por: Johansson, Kristoffer, et al.
Publicado: (2021)

An integrative analysis reveals coordinated reprogramming of the epigenome and the transcriptome in human skeletal muscle after training
por: Lindholm, Maléne E, et al.
Publicado: (2014)

A pipeline for RNA-seq data processing and quality assessment
por: Goncalves, Angela, et al.
Publicado: (2011)

Towards reconstruction of gene networks from expression data by supervised learning
por: Soinov, Lev A, et al.
Publicado: (2003)

Contributions of transcription and mRNA decay to gene expression dynamics of fission yeast in response to oxidative stress
por: Marguerat, Samuel, et al.
Publicado: (2014)

Cellular phenotype database: a repository for systems microscopy data
por: Kirsanova, Catherine, et al.
Publicado: (2015)

Benchmarking strategies for cross-species integration of single-cell RNA sequencing data
por: Song, Yuyao, et al.
Publicado: (2023)

Prediction of Gene Expression in Embryonic Structures of Drosophila melanogaster
por: Samsonova, Anastasia A, et al.
Publicado: (2007)

The ATLAS b-Jet Trigger
por: Hansson Adrian, Per Ola
Publicado: (2011)

Fast skeletal muscle troponin activator CK‐2066260 mitigates skeletal muscle weakness independently of the underlying cause
por: Cheng, Arthur J., et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_es54tvn8rme4aht0s6mijfp74o