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Analysis of crystallization data in the Protein Data Bank

The Protein Data Bank (PDB) is the largest available repository of solved protein structures and contains a wealth of information on successful crystallization. Many centres have used their own experimental data to draw conclusions about proteins and the conditions in which they crystallize. Here, d...

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Detalles Bibliográficos
Autores principales: Kirkwood, Jobie, Hargreaves, David, O’Keefe, Simon, Wilson, Julie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4601584/
https://www.ncbi.nlm.nih.gov/pubmed/26457511
http://dx.doi.org/10.1107/S2053230X15014892
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author Kirkwood, Jobie
Hargreaves, David
O’Keefe, Simon
Wilson, Julie
author_facet Kirkwood, Jobie
Hargreaves, David
O’Keefe, Simon
Wilson, Julie
author_sort Kirkwood, Jobie
collection PubMed
description The Protein Data Bank (PDB) is the largest available repository of solved protein structures and contains a wealth of information on successful crystallization. Many centres have used their own experimental data to draw conclusions about proteins and the conditions in which they crystallize. Here, data from the PDB were used to reanalyse some of these results. The most successful crystallization reagents were identified, the link between solution pH and the isoelectric point of the protein was investigated and the possibility of predicting whether a protein will crystallize was explored.
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spelling pubmed-46015842015-10-25 Analysis of crystallization data in the Protein Data Bank Kirkwood, Jobie Hargreaves, David O’Keefe, Simon Wilson, Julie Acta Crystallogr F Struct Biol Commun Research Communications The Protein Data Bank (PDB) is the largest available repository of solved protein structures and contains a wealth of information on successful crystallization. Many centres have used their own experimental data to draw conclusions about proteins and the conditions in which they crystallize. Here, data from the PDB were used to reanalyse some of these results. The most successful crystallization reagents were identified, the link between solution pH and the isoelectric point of the protein was investigated and the possibility of predicting whether a protein will crystallize was explored. International Union of Crystallography 2015-09-23 /pmc/articles/PMC4601584/ /pubmed/26457511 http://dx.doi.org/10.1107/S2053230X15014892 Text en © Kirkwood et al. 2015 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Kirkwood, Jobie
Hargreaves, David
O’Keefe, Simon
Wilson, Julie
Analysis of crystallization data in the Protein Data Bank
title Analysis of crystallization data in the Protein Data Bank
title_full Analysis of crystallization data in the Protein Data Bank
title_fullStr Analysis of crystallization data in the Protein Data Bank
title_full_unstemmed Analysis of crystallization data in the Protein Data Bank
title_short Analysis of crystallization data in the Protein Data Bank
title_sort analysis of crystallization data in the protein data bank
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4601584/
https://www.ncbi.nlm.nih.gov/pubmed/26457511
http://dx.doi.org/10.1107/S2053230X15014892
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