Cargando…

Data on individual PCR efficiency values as quality control for circulating miRNAs

This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting...

Descripción completa

Detalles Bibliográficos
Autores principales: Brunet-Vega, Anna, Pericay, Carles, Quílez, María Elisa, Ramírez-Lázaro, María José, Calvet, Xavier, Lario, Sergio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602359/
https://www.ncbi.nlm.nih.gov/pubmed/26568973
http://dx.doi.org/10.1016/j.dib.2015.09.011
_version_ 1782394706892685312
author Brunet-Vega, Anna
Pericay, Carles
Quílez, María Elisa
Ramírez-Lázaro, María José
Calvet, Xavier
Lario, Sergio
author_facet Brunet-Vega, Anna
Pericay, Carles
Quílez, María Elisa
Ramírez-Lázaro, María José
Calvet, Xavier
Lario, Sergio
author_sort Brunet-Vega, Anna
collection PubMed
description This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting the quality of qPCR results. Constant amplification efficiency in all compared samples is indispensable when relative quantification is used to measure changes in gene expression. An easy way to measure PCR efficiency, without the need of a standard curve, is LinRegPCR software. Individual PCR efficiency can be determined as a part of qPCR quality control. This is especially important when the initial RNA quantity is so low that cannot be accurately quantified, such as in circulating RNA extractions. This data article reports the Cqs and PCR efficiencies of 5 miRNAs quantified in RNA isolated from 4 patients with colorectal cancer (CRC) and 4 healthy donors using five commercially available kits.
format Online
Article
Text
id pubmed-4602359
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-46023592015-11-13 Data on individual PCR efficiency values as quality control for circulating miRNAs Brunet-Vega, Anna Pericay, Carles Quílez, María Elisa Ramírez-Lázaro, María José Calvet, Xavier Lario, Sergio Data Brief Data Article This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting the quality of qPCR results. Constant amplification efficiency in all compared samples is indispensable when relative quantification is used to measure changes in gene expression. An easy way to measure PCR efficiency, without the need of a standard curve, is LinRegPCR software. Individual PCR efficiency can be determined as a part of qPCR quality control. This is especially important when the initial RNA quantity is so low that cannot be accurately quantified, such as in circulating RNA extractions. This data article reports the Cqs and PCR efficiencies of 5 miRNAs quantified in RNA isolated from 4 patients with colorectal cancer (CRC) and 4 healthy donors using five commercially available kits. Elsevier 2015-09-26 /pmc/articles/PMC4602359/ /pubmed/26568973 http://dx.doi.org/10.1016/j.dib.2015.09.011 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Brunet-Vega, Anna
Pericay, Carles
Quílez, María Elisa
Ramírez-Lázaro, María José
Calvet, Xavier
Lario, Sergio
Data on individual PCR efficiency values as quality control for circulating miRNAs
title Data on individual PCR efficiency values as quality control for circulating miRNAs
title_full Data on individual PCR efficiency values as quality control for circulating miRNAs
title_fullStr Data on individual PCR efficiency values as quality control for circulating miRNAs
title_full_unstemmed Data on individual PCR efficiency values as quality control for circulating miRNAs
title_short Data on individual PCR efficiency values as quality control for circulating miRNAs
title_sort data on individual pcr efficiency values as quality control for circulating mirnas
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602359/
https://www.ncbi.nlm.nih.gov/pubmed/26568973
http://dx.doi.org/10.1016/j.dib.2015.09.011
work_keys_str_mv AT brunetvegaanna dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas
AT pericaycarles dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas
AT quilezmariaelisa dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas
AT ramirezlazaromariajose dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas
AT calvetxavier dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas
AT lariosergio dataonindividualpcrefficiencyvaluesasqualitycontrolforcirculatingmirnas