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Data on individual PCR efficiency values as quality control for circulating miRNAs
This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602359/ https://www.ncbi.nlm.nih.gov/pubmed/26568973 http://dx.doi.org/10.1016/j.dib.2015.09.011 |
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author | Brunet-Vega, Anna Pericay, Carles Quílez, María Elisa Ramírez-Lázaro, María José Calvet, Xavier Lario, Sergio |
author_facet | Brunet-Vega, Anna Pericay, Carles Quílez, María Elisa Ramírez-Lázaro, María José Calvet, Xavier Lario, Sergio |
author_sort | Brunet-Vega, Anna |
collection | PubMed |
description | This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting the quality of qPCR results. Constant amplification efficiency in all compared samples is indispensable when relative quantification is used to measure changes in gene expression. An easy way to measure PCR efficiency, without the need of a standard curve, is LinRegPCR software. Individual PCR efficiency can be determined as a part of qPCR quality control. This is especially important when the initial RNA quantity is so low that cannot be accurately quantified, such as in circulating RNA extractions. This data article reports the Cqs and PCR efficiencies of 5 miRNAs quantified in RNA isolated from 4 patients with colorectal cancer (CRC) and 4 healthy donors using five commercially available kits. |
format | Online Article Text |
id | pubmed-4602359 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-46023592015-11-13 Data on individual PCR efficiency values as quality control for circulating miRNAs Brunet-Vega, Anna Pericay, Carles Quílez, María Elisa Ramírez-Lázaro, María José Calvet, Xavier Lario, Sergio Data Brief Data Article This data article contains data related to the research article entitled “Variability in microRNA recovery from plasma: Comparison of five commercial kits, doi:10.1016/j.ab.2015.07.018” Brunet-Vega (2015) [1]. PCR efficiency, along with RNA and cDNA quality, are the most important factors affecting the quality of qPCR results. Constant amplification efficiency in all compared samples is indispensable when relative quantification is used to measure changes in gene expression. An easy way to measure PCR efficiency, without the need of a standard curve, is LinRegPCR software. Individual PCR efficiency can be determined as a part of qPCR quality control. This is especially important when the initial RNA quantity is so low that cannot be accurately quantified, such as in circulating RNA extractions. This data article reports the Cqs and PCR efficiencies of 5 miRNAs quantified in RNA isolated from 4 patients with colorectal cancer (CRC) and 4 healthy donors using five commercially available kits. Elsevier 2015-09-26 /pmc/articles/PMC4602359/ /pubmed/26568973 http://dx.doi.org/10.1016/j.dib.2015.09.011 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Brunet-Vega, Anna Pericay, Carles Quílez, María Elisa Ramírez-Lázaro, María José Calvet, Xavier Lario, Sergio Data on individual PCR efficiency values as quality control for circulating miRNAs |
title | Data on individual PCR efficiency values as quality control for circulating miRNAs |
title_full | Data on individual PCR efficiency values as quality control for circulating miRNAs |
title_fullStr | Data on individual PCR efficiency values as quality control for circulating miRNAs |
title_full_unstemmed | Data on individual PCR efficiency values as quality control for circulating miRNAs |
title_short | Data on individual PCR efficiency values as quality control for circulating miRNAs |
title_sort | data on individual pcr efficiency values as quality control for circulating mirnas |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4602359/ https://www.ncbi.nlm.nih.gov/pubmed/26568973 http://dx.doi.org/10.1016/j.dib.2015.09.011 |
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