Cargando…

Genome-wide analysis of myxobacterial two-component systems: genome relatedness and evolutionary changes

BACKGROUND: Two-component systems (TCSs) are abundant prokaryotic signaling pathways, whose evolution is of particular importance because of their role in bacterial pathogenicity. Comparative genomics can provide important insights into the evolution of these genes, but inferences are dependent on t...

Descripción completa

Detalles Bibliográficos
Autor principal:	Whitworth, David E.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4603909/ https://www.ncbi.nlm.nih.gov/pubmed/26463047 http://dx.doi.org/10.1186/s12864-015-2018-y

Ejemplares similares

Myxobacterial Genomics and Post-Genomics: A Review of Genome Biology, Genome Sequences and Related ‘Omics Studies
por: Whitworth, David E., et al.
Publicado: (2021)

Spatial Simulations of Myxobacterial Development
por: Holmes, Antony B., et al.
Publicado: (2010)

Genome-Wide Identification of Myxobacterial Predation Genes and Demonstration of Formaldehyde Secretion as a Potentially Predation-Resistant Trait of Pseudomonas aeruginosa
por: Sutton, Daryn, et al.
Publicado: (2019)

Unravelling the Complete Genome of Archangium gephyra DSM 2261(T) and Evolutionary Insights into Myxobacterial Chitinases
por: Sharma, Gaurav, et al.
Publicado: (2017)

Genome-Guided Discovery of the Myxobacterial Thiolactone-Containing Sorangibactins
por: Gao, Yunsheng, et al.
Publicado: (2023)

Transcriptional changes when Myxococcus xanthus preys on Escherichia coli suggest myxobacterial predators are constitutively toxic but regulate their feeding
por: Livingstone, Paul G., et al.
Publicado: (2018)

Myxobacterial Predation: A Standardised Lawn Predation Assay Highlights Strains with Unusually Efficient Predatory Activity
por: Zwarycz, Allison S., et al.
Publicado: (2023)

Genome-wide prediction of prokaryotic two-component system networks using a sequence-based meta-predictor
por: Kara, Altan, et al.
Publicado: (2015)

Social Interactions in Myxobacterial Swarming
por: Wu, Yilin, et al.
Publicado: (2007)

Comparative genomics and transcriptomics insight into myxobacterial metabolism potentials and multiple predatory strategies
por: Wang, Chunling, et al.
Publicado: (2023)

Diversity and Evolution of Myxobacterial Type IV Pilus Systems
por: Sharma, Gaurav, et al.
Publicado: (2018)

Identification of secondary metabolites containing a diketopiperazine core in extracts from myxobacterial strains with growth inhibition activity against a range of prey species
por: Radford, Emily J., et al.
Publicado: (2023)

Methods to optimize myxobacterial fermentations using off-gas analysis
por: Hüttel, Stephan, et al.
Publicado: (2012)

Genome-Wide Analysis of Two-Component Systems and Prediction of Stress-Responsive Two-Component System Members in Soybean
por: Mochida, Keiichi, et al.
Publicado: (2010)

Genome-wide identification and interactome analysis of members of two-component system in Banana
por: Dhar, Yogeshwar V., et al.
Publicado: (2019)

Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry
por: Baranwal, Vinay Kumar, et al.
Publicado: (2016)

Comparison of Methods to Account for Relatedness in Genome-Wide Association Studies with Family-Based Data
por: Eu-ahsunthornwattana, Jakris, et al.
Publicado: (2014)

Benchmarking Relatedness Inference Methods with Genome-Wide Data from Thousands of Relatives
por: Ramstetter, Monica D., et al.
Publicado: (2017)

Functional genomics study of Pseudomonas putida to determine traits associated with avoidance of a myxobacterial predator
por: Akbar, Shukria, et al.
Publicado: (2021)

Heterologous Biosynthesis of Myxobacterial Antibiotic Miuraenamide A
por: Liu, Ying, et al.
Publicado: (2023)

Thiamyxins: Structure and Biosynthesis of Myxobacterial RNA‐Virus Inhibitors
por: Haack, Patrick A., et al.
Publicado: (2022)

Genome-Wide Identification and Expression Analysis of Two-Component System Genes in Tomato
por: He, Yanjun, et al.
Publicado: (2016)

Draft Genome Sequences of the Obligatory Marine Myxobacterial Strains Enhygromyxa salina SWB005 and SWB007
por: Amiri Moghaddam, Jamshid, et al.
Publicado: (2018)

GRAPE: genomic relatedness detection pipeline
por: Medvedev, Alexander, et al.
Publicado: (2023)

Genomic Inbreeding and Relatedness in Wild Panda Populations
por: Garbe, John R., et al.
Publicado: (2016)

QTLRel: an R Package for Genome-wide Association Studies in which Relatedness is a Concern
por: Cheng, Riyan, et al.
Publicado: (2011)

A Disturbed Siderophore Transport Inhibits Myxobacterial Predation
por: Dong, Yijie, et al.
Publicado: (2022)

A Genome-Wide Compilation of the Two-Component Systems in Lotus japonicus
por: Ishida, Kai, et al.
Publicado: (2009)

Controlling for Phylogenetic Relatedness and Evolutionary Rates Improves the Discovery of Associations Between Species’ Phenotypic and Genomic Differences
por: Prudent, Xavier, et al.
Publicado: (2016)

Comparison of myxobacterial diversity and evaluation of isolation success in two niches: Kiritimati Island and German compost
por: Mohr, Kathrin I., et al.
Publicado: (2015)

The complete genome sequence and analysis of a plasmid-bearing myxobacterial strain Myxococcus fulvus 124B02 (M 206081)
por: Chen, Xiao-jing, et al.
Publicado: (2016)

The genetic organisation of prokaryotic two-component system signalling pathways
por: Williams, Robert HN, et al.
Publicado: (2010)

PSReliP: an integrated pipeline for analysis and visualization of population structure and relatedness based on genome-wide genetic variant data
por: Solovieva, Elena, et al.
Publicado: (2023)

Genome Analysis and Phylogenetic Relatedness of Gallibacterium anatis Strains from Poultry
por: Johnson, Timothy J., et al.
Publicado: (2013)

Genomic relatedness of Staphylococcus pettenkoferi isolates of different origins
por: Månsson, Emeli, et al.
Publicado: (2017)

Genomic relatedness and diversity of Swedish native cattle breeds
por: Upadhyay, Maulik, et al.
Publicado: (2019)

Genome-wide characterization of the NLR gene family in tomato (Solanum lycopersicum) and their relatedness to disease resistance
por: Bashir, Sehrish, et al.
Publicado: (2022)

2-Hydroxysorangiadenosine: Structure and Biosynthesis of a Myxobacterial Sesquiterpene–Nucleoside
por: Okoth, Dorothy A., et al.
Publicado: (2020)

Automated identification of Myxobacterial genera using Convolutional Neural Network
por: Sajedi, Hedieh, et al.
Publicado: (2019)

The impact of genomic relatedness between populations on the genomic estimated breeding values
por: Ma, Peipei, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_mnd9d5lbd215ghuoe8ii39s9qv