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Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study
BACKGROUND: Non-cellular blood circulating microRNAs (plasma miRNAs) represent a promising source for the development of prognostic and diagnostic tools owing to their minimally invasive sampling, high stability, and simple quantification by standard techniques such as RT-qPCR. So far, the majority...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604724/ https://www.ncbi.nlm.nih.gov/pubmed/26462558 http://dx.doi.org/10.1186/s12920-015-0136-7 |
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author | Ameling, Sabine Kacprowski, Tim Chilukoti, Ravi Kumar Malsch, Carolin Liebscher, Volkmar Suhre, Karsten Pietzner, Maik Friedrich, Nele Homuth, Georg Hammer, Elke Völker, Uwe |
author_facet | Ameling, Sabine Kacprowski, Tim Chilukoti, Ravi Kumar Malsch, Carolin Liebscher, Volkmar Suhre, Karsten Pietzner, Maik Friedrich, Nele Homuth, Georg Hammer, Elke Völker, Uwe |
author_sort | Ameling, Sabine |
collection | PubMed |
description | BACKGROUND: Non-cellular blood circulating microRNAs (plasma miRNAs) represent a promising source for the development of prognostic and diagnostic tools owing to their minimally invasive sampling, high stability, and simple quantification by standard techniques such as RT-qPCR. So far, the majority of association studies involving plasma miRNAs were disease-specific case-control analyses. In contrast, in the present study, plasma miRNAs were analysed in a sample of 372 individuals from a population-based cohort study, the Study of Health in Pomerania (SHIP). METHODS: Quantification of miRNA levels was performed by RT-qPCR using the Exiqon Serum/Plasma Focus microRNA PCR Panel V3.M covering 179 different miRNAs. Of these, 155 were included in our analyses after quality-control. Associations between plasma miRNAs and the phenotypes age, body mass index (BMI), and sex were assessed via a two-step linear regression approach per miRNA. The first step regressed out the technical parameters and the second step determined the remaining associations between the respective plasma miRNA and the phenotypes of interest. RESULTS: After regressing out technical parameters and adjusting for the respective other two phenotypes, 7, 15, and 35 plasma miRNAs were significantly (q < 0.05) associated with age, BMI, and sex, respectively. Additional adjustment for the blood cell parameters identified 12 and 19 miRNAs to be significantly associated with age and BMI, respectively. Most of the BMI-associated miRNAs likely originate from liver. Sex-associated differences in miRNA levels were largely determined by differences in blood cell parameters. Thus, only 7 as compared to originally 35 sex-associated miRNAs displayed sex-specific differences after adjustment for blood cell parameters. CONCLUSIONS: These findings emphasize that circulating miRNAs are strongly impacted by age, BMI, and sex. Hence, these parameters should be considered as covariates in association studies based on plasma miRNA levels. The established experimental and computational workflow can now be used in future screening studies to determine associations of plasma miRNAs with defined disease phenotypes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12920-015-0136-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4604724 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-46047242015-10-15 Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study Ameling, Sabine Kacprowski, Tim Chilukoti, Ravi Kumar Malsch, Carolin Liebscher, Volkmar Suhre, Karsten Pietzner, Maik Friedrich, Nele Homuth, Georg Hammer, Elke Völker, Uwe BMC Med Genomics Research Article BACKGROUND: Non-cellular blood circulating microRNAs (plasma miRNAs) represent a promising source for the development of prognostic and diagnostic tools owing to their minimally invasive sampling, high stability, and simple quantification by standard techniques such as RT-qPCR. So far, the majority of association studies involving plasma miRNAs were disease-specific case-control analyses. In contrast, in the present study, plasma miRNAs were analysed in a sample of 372 individuals from a population-based cohort study, the Study of Health in Pomerania (SHIP). METHODS: Quantification of miRNA levels was performed by RT-qPCR using the Exiqon Serum/Plasma Focus microRNA PCR Panel V3.M covering 179 different miRNAs. Of these, 155 were included in our analyses after quality-control. Associations between plasma miRNAs and the phenotypes age, body mass index (BMI), and sex were assessed via a two-step linear regression approach per miRNA. The first step regressed out the technical parameters and the second step determined the remaining associations between the respective plasma miRNA and the phenotypes of interest. RESULTS: After regressing out technical parameters and adjusting for the respective other two phenotypes, 7, 15, and 35 plasma miRNAs were significantly (q < 0.05) associated with age, BMI, and sex, respectively. Additional adjustment for the blood cell parameters identified 12 and 19 miRNAs to be significantly associated with age and BMI, respectively. Most of the BMI-associated miRNAs likely originate from liver. Sex-associated differences in miRNA levels were largely determined by differences in blood cell parameters. Thus, only 7 as compared to originally 35 sex-associated miRNAs displayed sex-specific differences after adjustment for blood cell parameters. CONCLUSIONS: These findings emphasize that circulating miRNAs are strongly impacted by age, BMI, and sex. Hence, these parameters should be considered as covariates in association studies based on plasma miRNA levels. The established experimental and computational workflow can now be used in future screening studies to determine associations of plasma miRNAs with defined disease phenotypes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12920-015-0136-7) contains supplementary material, which is available to authorized users. BioMed Central 2015-10-14 /pmc/articles/PMC4604724/ /pubmed/26462558 http://dx.doi.org/10.1186/s12920-015-0136-7 Text en © Ameling et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Ameling, Sabine Kacprowski, Tim Chilukoti, Ravi Kumar Malsch, Carolin Liebscher, Volkmar Suhre, Karsten Pietzner, Maik Friedrich, Nele Homuth, Georg Hammer, Elke Völker, Uwe Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title | Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title_full | Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title_fullStr | Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title_full_unstemmed | Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title_short | Associations of circulating plasma microRNAs with age, body mass index and sex in a population-based study |
title_sort | associations of circulating plasma micrornas with age, body mass index and sex in a population-based study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4604724/ https://www.ncbi.nlm.nih.gov/pubmed/26462558 http://dx.doi.org/10.1186/s12920-015-0136-7 |
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