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Inferring Models of Bacterial Dynamics toward Point Sources

Experiments have shown that bacteria can be sensitive to small variations in chemoattractant (CA) concentrations. Motivated by these findings, our focus here is on a regime rarely studied in experiments: bacteria tracking point CA sources (such as food patches or even prey). In tracking point source...

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Autores principales: Jashnsaz, Hossein, Nguyen, Tyler, Petrache, Horia I., Pressé, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605597/
https://www.ncbi.nlm.nih.gov/pubmed/26466373
http://dx.doi.org/10.1371/journal.pone.0140428
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author Jashnsaz, Hossein
Nguyen, Tyler
Petrache, Horia I.
Pressé, Steve
author_facet Jashnsaz, Hossein
Nguyen, Tyler
Petrache, Horia I.
Pressé, Steve
author_sort Jashnsaz, Hossein
collection PubMed
description Experiments have shown that bacteria can be sensitive to small variations in chemoattractant (CA) concentrations. Motivated by these findings, our focus here is on a regime rarely studied in experiments: bacteria tracking point CA sources (such as food patches or even prey). In tracking point sources, the CA detected by bacteria may show very large spatiotemporal fluctuations which vary with distance from the source. We present a general statistical model to describe how bacteria locate point sources of food on the basis of stochastic event detection, rather than CA gradient information. We show how all model parameters can be directly inferred from single cell tracking data even in the limit of high detection noise. Once parameterized, our model recapitulates bacterial behavior around point sources such as the “volcano effect”. In addition, while the search by bacteria for point sources such as prey may appear random, our model identifies key statistical signatures of a targeted search for a point source given any arbitrary source configuration.
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spelling pubmed-46055972015-10-29 Inferring Models of Bacterial Dynamics toward Point Sources Jashnsaz, Hossein Nguyen, Tyler Petrache, Horia I. Pressé, Steve PLoS One Research Article Experiments have shown that bacteria can be sensitive to small variations in chemoattractant (CA) concentrations. Motivated by these findings, our focus here is on a regime rarely studied in experiments: bacteria tracking point CA sources (such as food patches or even prey). In tracking point sources, the CA detected by bacteria may show very large spatiotemporal fluctuations which vary with distance from the source. We present a general statistical model to describe how bacteria locate point sources of food on the basis of stochastic event detection, rather than CA gradient information. We show how all model parameters can be directly inferred from single cell tracking data even in the limit of high detection noise. Once parameterized, our model recapitulates bacterial behavior around point sources such as the “volcano effect”. In addition, while the search by bacteria for point sources such as prey may appear random, our model identifies key statistical signatures of a targeted search for a point source given any arbitrary source configuration. Public Library of Science 2015-10-14 /pmc/articles/PMC4605597/ /pubmed/26466373 http://dx.doi.org/10.1371/journal.pone.0140428 Text en © 2015 Jashnsaz et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Jashnsaz, Hossein
Nguyen, Tyler
Petrache, Horia I.
Pressé, Steve
Inferring Models of Bacterial Dynamics toward Point Sources
title Inferring Models of Bacterial Dynamics toward Point Sources
title_full Inferring Models of Bacterial Dynamics toward Point Sources
title_fullStr Inferring Models of Bacterial Dynamics toward Point Sources
title_full_unstemmed Inferring Models of Bacterial Dynamics toward Point Sources
title_short Inferring Models of Bacterial Dynamics toward Point Sources
title_sort inferring models of bacterial dynamics toward point sources
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605597/
https://www.ncbi.nlm.nih.gov/pubmed/26466373
http://dx.doi.org/10.1371/journal.pone.0140428
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