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Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Vision
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605750/ https://www.ncbi.nlm.nih.gov/pubmed/26539030 |
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author | Mohd Khalid, Mohd Khairul Nizam Yakob, Yusnita Md Yasin, Rohani Wee Teik, Keng Gaik Siew, Ch’ng Rahmat, Jamalia Ramasamy, Sunder Alagaratnam, Joseph |
author_facet | Mohd Khalid, Mohd Khairul Nizam Yakob, Yusnita Md Yasin, Rohani Wee Teik, Keng Gaik Siew, Ch’ng Rahmat, Jamalia Ramasamy, Sunder Alagaratnam, Joseph |
author_sort | Mohd Khalid, Mohd Khairul Nizam |
collection | PubMed |
description | PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy for performing molecular genetic testing of the RB1 gene and the findings from our first 2 years of starting this service. METHODS: The peripheral blood of 19 RB probands, including seven bilateral and 12 unilateral cases, was obtained, and genomic DNA was extracted. Analysis of the RB1 exons and the promoter region was conducted first using PCR and direct sequencing. Next, multiplex ligation-dependent probe amplification (MLPA) analysis was performed for patients whom the first results were negative. For patients whom either the first or second method results were positive, parental samples were analyzed to determine the origin of the mutation. RESULTS: Ten RB1 mutations were identified in ten (52.6%) of the 19 probands (seven bilateral and three unilateral cases), of which 30.0% (3/10) was identified with MLPA. The detection rates in the bilateral and unilateral cases were 100.0% (7/7) and 25.0% (3/12), respectively. Three new RB1 mutations were discovered, two in patients with bilateral RB and one in patient with unilateral RB. Interestingly, all mutations detected with the PCR-sequencing method were predicted to create a premature stop codon. Eight mutations were proven to be de novo while one mutation was inherited from the mother in a family with a positive history of RB. CONCLUSIONS: Our results confirmed the heterogeneous nature of RB1 mutations and the predominantly de novo origin. The high prevalence of pathogenic truncating mutations was evident among local patients with RB. The combination of PCR sequencing and MLPA is recommended for sensitive identification of heritable RB cases. |
format | Online Article Text |
id | pubmed-4605750 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Molecular Vision |
record_format | MEDLINE/PubMed |
spelling | pubmed-46057502015-11-04 Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma Mohd Khalid, Mohd Khairul Nizam Yakob, Yusnita Md Yasin, Rohani Wee Teik, Keng Gaik Siew, Ch’ng Rahmat, Jamalia Ramasamy, Sunder Alagaratnam, Joseph Mol Vis Research Article PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy for performing molecular genetic testing of the RB1 gene and the findings from our first 2 years of starting this service. METHODS: The peripheral blood of 19 RB probands, including seven bilateral and 12 unilateral cases, was obtained, and genomic DNA was extracted. Analysis of the RB1 exons and the promoter region was conducted first using PCR and direct sequencing. Next, multiplex ligation-dependent probe amplification (MLPA) analysis was performed for patients whom the first results were negative. For patients whom either the first or second method results were positive, parental samples were analyzed to determine the origin of the mutation. RESULTS: Ten RB1 mutations were identified in ten (52.6%) of the 19 probands (seven bilateral and three unilateral cases), of which 30.0% (3/10) was identified with MLPA. The detection rates in the bilateral and unilateral cases were 100.0% (7/7) and 25.0% (3/12), respectively. Three new RB1 mutations were discovered, two in patients with bilateral RB and one in patient with unilateral RB. Interestingly, all mutations detected with the PCR-sequencing method were predicted to create a premature stop codon. Eight mutations were proven to be de novo while one mutation was inherited from the mother in a family with a positive history of RB. CONCLUSIONS: Our results confirmed the heterogeneous nature of RB1 mutations and the predominantly de novo origin. The high prevalence of pathogenic truncating mutations was evident among local patients with RB. The combination of PCR sequencing and MLPA is recommended for sensitive identification of heritable RB cases. Molecular Vision 2015-10-14 /pmc/articles/PMC4605750/ /pubmed/26539030 Text en Copyright © 2015 Molecular Vision. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited, used for non-commercial purposes, and is not altered or transformed. |
spellingShingle | Research Article Mohd Khalid, Mohd Khairul Nizam Yakob, Yusnita Md Yasin, Rohani Wee Teik, Keng Gaik Siew, Ch’ng Rahmat, Jamalia Ramasamy, Sunder Alagaratnam, Joseph Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title | Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title_full | Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title_fullStr | Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title_full_unstemmed | Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title_short | Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma |
title_sort | spectrum of germ-line rb1 gene mutations in malaysian patients with retinoblastoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605750/ https://www.ncbi.nlm.nih.gov/pubmed/26539030 |
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