Cargando…

Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma

PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy...

Descripción completa

Detalles Bibliográficos
Autores principales: Mohd Khalid, Mohd Khairul Nizam, Yakob, Yusnita, Md Yasin, Rohani, Wee Teik, Keng, Gaik Siew, Ch’ng, Rahmat, Jamalia, Ramasamy, Sunder, Alagaratnam, Joseph
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Vision 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605750/
https://www.ncbi.nlm.nih.gov/pubmed/26539030
_version_ 1782395254620553216
author Mohd Khalid, Mohd Khairul Nizam
Yakob, Yusnita
Md Yasin, Rohani
Wee Teik, Keng
Gaik Siew, Ch’ng
Rahmat, Jamalia
Ramasamy, Sunder
Alagaratnam, Joseph
author_facet Mohd Khalid, Mohd Khairul Nizam
Yakob, Yusnita
Md Yasin, Rohani
Wee Teik, Keng
Gaik Siew, Ch’ng
Rahmat, Jamalia
Ramasamy, Sunder
Alagaratnam, Joseph
author_sort Mohd Khalid, Mohd Khairul Nizam
collection PubMed
description PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy for performing molecular genetic testing of the RB1 gene and the findings from our first 2 years of starting this service. METHODS: The peripheral blood of 19 RB probands, including seven bilateral and 12 unilateral cases, was obtained, and genomic DNA was extracted. Analysis of the RB1 exons and the promoter region was conducted first using PCR and direct sequencing. Next, multiplex ligation-dependent probe amplification (MLPA) analysis was performed for patients whom the first results were negative. For patients whom either the first or second method results were positive, parental samples were analyzed to determine the origin of the mutation. RESULTS: Ten RB1 mutations were identified in ten (52.6%) of the 19 probands (seven bilateral and three unilateral cases), of which 30.0% (3/10) was identified with MLPA. The detection rates in the bilateral and unilateral cases were 100.0% (7/7) and 25.0% (3/12), respectively. Three new RB1 mutations were discovered, two in patients with bilateral RB and one in patient with unilateral RB. Interestingly, all mutations detected with the PCR-sequencing method were predicted to create a premature stop codon. Eight mutations were proven to be de novo while one mutation was inherited from the mother in a family with a positive history of RB. CONCLUSIONS: Our results confirmed the heterogeneous nature of RB1 mutations and the predominantly de novo origin. The high prevalence of pathogenic truncating mutations was evident among local patients with RB. The combination of PCR sequencing and MLPA is recommended for sensitive identification of heritable RB cases.
format Online
Article
Text
id pubmed-4605750
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Molecular Vision
record_format MEDLINE/PubMed
spelling pubmed-46057502015-11-04 Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma Mohd Khalid, Mohd Khairul Nizam Yakob, Yusnita Md Yasin, Rohani Wee Teik, Keng Gaik Siew, Ch’ng Rahmat, Jamalia Ramasamy, Sunder Alagaratnam, Joseph Mol Vis Research Article PURPOSE: The availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy for performing molecular genetic testing of the RB1 gene and the findings from our first 2 years of starting this service. METHODS: The peripheral blood of 19 RB probands, including seven bilateral and 12 unilateral cases, was obtained, and genomic DNA was extracted. Analysis of the RB1 exons and the promoter region was conducted first using PCR and direct sequencing. Next, multiplex ligation-dependent probe amplification (MLPA) analysis was performed for patients whom the first results were negative. For patients whom either the first or second method results were positive, parental samples were analyzed to determine the origin of the mutation. RESULTS: Ten RB1 mutations were identified in ten (52.6%) of the 19 probands (seven bilateral and three unilateral cases), of which 30.0% (3/10) was identified with MLPA. The detection rates in the bilateral and unilateral cases were 100.0% (7/7) and 25.0% (3/12), respectively. Three new RB1 mutations were discovered, two in patients with bilateral RB and one in patient with unilateral RB. Interestingly, all mutations detected with the PCR-sequencing method were predicted to create a premature stop codon. Eight mutations were proven to be de novo while one mutation was inherited from the mother in a family with a positive history of RB. CONCLUSIONS: Our results confirmed the heterogeneous nature of RB1 mutations and the predominantly de novo origin. The high prevalence of pathogenic truncating mutations was evident among local patients with RB. The combination of PCR sequencing and MLPA is recommended for sensitive identification of heritable RB cases. Molecular Vision 2015-10-14 /pmc/articles/PMC4605750/ /pubmed/26539030 Text en Copyright © 2015 Molecular Vision. http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited, used for non-commercial purposes, and is not altered or transformed.
spellingShingle Research Article
Mohd Khalid, Mohd Khairul Nizam
Yakob, Yusnita
Md Yasin, Rohani
Wee Teik, Keng
Gaik Siew, Ch’ng
Rahmat, Jamalia
Ramasamy, Sunder
Alagaratnam, Joseph
Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title_full Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title_fullStr Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title_full_unstemmed Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title_short Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma
title_sort spectrum of germ-line rb1 gene mutations in malaysian patients with retinoblastoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605750/
https://www.ncbi.nlm.nih.gov/pubmed/26539030
work_keys_str_mv AT mohdkhalidmohdkhairulnizam spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT yakobyusnita spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT mdyasinrohani spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT weeteikkeng spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT gaiksiewchng spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT rahmatjamalia spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT ramasamysunder spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma
AT alagaratnamjoseph spectrumofgermlinerb1genemutationsinmalaysianpatientswithretinoblastoma