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Derivation of induced pluripotent stem cells from orangutan skin fibroblasts

BACKGROUND: Orangutans are an endangered species whose natural habitats are restricted to the Southeast Asian islands of Borneo and Sumatra. Along with the African great apes, orangutans are among the closest living relatives to humans. For potential species conservation and functional genomics stud...

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Autores principales: Ramaswamy, Krishna, Yik, Wing Yan, Wang, Xiao-Ming, Oliphant, Erin N., Lu, Wange, Shibata, Darryl, Ryder, Oliver A., Hacia, Joseph G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609060/
https://www.ncbi.nlm.nih.gov/pubmed/26475477
http://dx.doi.org/10.1186/s13104-015-1567-0
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author Ramaswamy, Krishna
Yik, Wing Yan
Wang, Xiao-Ming
Oliphant, Erin N.
Lu, Wange
Shibata, Darryl
Ryder, Oliver A.
Hacia, Joseph G.
author_facet Ramaswamy, Krishna
Yik, Wing Yan
Wang, Xiao-Ming
Oliphant, Erin N.
Lu, Wange
Shibata, Darryl
Ryder, Oliver A.
Hacia, Joseph G.
author_sort Ramaswamy, Krishna
collection PubMed
description BACKGROUND: Orangutans are an endangered species whose natural habitats are restricted to the Southeast Asian islands of Borneo and Sumatra. Along with the African great apes, orangutans are among the closest living relatives to humans. For potential species conservation and functional genomics studies, we derived induced pluripotent stem cells (iPSCs) from cryopreserved somatic cells obtained from captive orangutans. RESULTS: Primary skin fibroblasts from two Sumatran orangutans were transduced with retroviral vectors expressing the human OCT4, SOX2, KLF4, and c-MYC factors. Candidate orangutan iPSCs were characterized by global gene expression and DNA copy number analysis. All were consistent with pluripotency and provided no evidence of large genomic insertions or deletions. In addition, orangutan iPSCs were capable of producing cells derived from all three germ layers in vitro through embryoid body differentiation assays and in vivo through teratoma formation in immune-compromised mice. CONCLUSIONS: We demonstrate that orangutan skin fibroblasts are capable of being reprogrammed into iPSCs with hallmark molecular signatures and differentiation potential. We suggest that reprogramming orangutan somatic cells in genome resource banks could provide new opportunities for advancing assisted reproductive technologies relevant for species conservation efforts. Furthermore, orangutan iPSCs could have applications for investigating the phenotypic relevance of genomic changes that occurred in the human, African great ape, and/or orangutan lineages. This provides opportunities for orangutan cell culture models that would otherwise be impossible to develop from living donors due to the invasive nature of the procedures required for obtaining primary cells. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13104-015-1567-0) contains supplementary material, which is available to authorized users.
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spelling pubmed-46090602015-10-18 Derivation of induced pluripotent stem cells from orangutan skin fibroblasts Ramaswamy, Krishna Yik, Wing Yan Wang, Xiao-Ming Oliphant, Erin N. Lu, Wange Shibata, Darryl Ryder, Oliver A. Hacia, Joseph G. BMC Res Notes Research Article BACKGROUND: Orangutans are an endangered species whose natural habitats are restricted to the Southeast Asian islands of Borneo and Sumatra. Along with the African great apes, orangutans are among the closest living relatives to humans. For potential species conservation and functional genomics studies, we derived induced pluripotent stem cells (iPSCs) from cryopreserved somatic cells obtained from captive orangutans. RESULTS: Primary skin fibroblasts from two Sumatran orangutans were transduced with retroviral vectors expressing the human OCT4, SOX2, KLF4, and c-MYC factors. Candidate orangutan iPSCs were characterized by global gene expression and DNA copy number analysis. All were consistent with pluripotency and provided no evidence of large genomic insertions or deletions. In addition, orangutan iPSCs were capable of producing cells derived from all three germ layers in vitro through embryoid body differentiation assays and in vivo through teratoma formation in immune-compromised mice. CONCLUSIONS: We demonstrate that orangutan skin fibroblasts are capable of being reprogrammed into iPSCs with hallmark molecular signatures and differentiation potential. We suggest that reprogramming orangutan somatic cells in genome resource banks could provide new opportunities for advancing assisted reproductive technologies relevant for species conservation efforts. Furthermore, orangutan iPSCs could have applications for investigating the phenotypic relevance of genomic changes that occurred in the human, African great ape, and/or orangutan lineages. This provides opportunities for orangutan cell culture models that would otherwise be impossible to develop from living donors due to the invasive nature of the procedures required for obtaining primary cells. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13104-015-1567-0) contains supplementary material, which is available to authorized users. BioMed Central 2015-10-16 /pmc/articles/PMC4609060/ /pubmed/26475477 http://dx.doi.org/10.1186/s13104-015-1567-0 Text en © Ramaswamy et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Ramaswamy, Krishna
Yik, Wing Yan
Wang, Xiao-Ming
Oliphant, Erin N.
Lu, Wange
Shibata, Darryl
Ryder, Oliver A.
Hacia, Joseph G.
Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title_full Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title_fullStr Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title_full_unstemmed Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title_short Derivation of induced pluripotent stem cells from orangutan skin fibroblasts
title_sort derivation of induced pluripotent stem cells from orangutan skin fibroblasts
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609060/
https://www.ncbi.nlm.nih.gov/pubmed/26475477
http://dx.doi.org/10.1186/s13104-015-1567-0
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