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Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)

PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic mic...

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Autores principales: Chen, Wen-Wen, Xiao, Zhen-Zhu, Tong, Xin, Liu, Yu-Pei, Li, Yuan-Yuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4610312/
https://www.ncbi.nlm.nih.gov/pubmed/26504681
http://dx.doi.org/10.3732/apps.1500057
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author Chen, Wen-Wen
Xiao, Zhen-Zhu
Tong, Xin
Liu, Yu-Pei
Li, Yuan-Yuan
author_facet Chen, Wen-Wen
Xiao, Zhen-Zhu
Tong, Xin
Liu, Yu-Pei
Li, Yuan-Yuan
author_sort Chen, Wen-Wen
collection PubMed
description PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic microsatellite markers were developed. Ten polymorphic loci were characterized by 87 individuals sampled from three populations located in Zhejiang Province and Shanghai, China. The number of alleles per locus varied from two to 12. The observed and expected heterozygosities were 0.0435–0.9032 and 0.3121–0.8343, respectively. CONCLUSIONS: These microsatellite markers can be useful for further genetic studies of I. chinensis populations, and so contribute to forest restoration and management.
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spelling pubmed-46103122015-10-26 Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) Chen, Wen-Wen Xiao, Zhen-Zhu Tong, Xin Liu, Yu-Pei Li, Yuan-Yuan Appl Plant Sci Primer Note PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic microsatellite markers were developed. Ten polymorphic loci were characterized by 87 individuals sampled from three populations located in Zhejiang Province and Shanghai, China. The number of alleles per locus varied from two to 12. The observed and expected heterozygosities were 0.0435–0.9032 and 0.3121–0.8343, respectively. CONCLUSIONS: These microsatellite markers can be useful for further genetic studies of I. chinensis populations, and so contribute to forest restoration and management. Botanical Society of America 2015-10-14 /pmc/articles/PMC4610312/ /pubmed/26504681 http://dx.doi.org/10.3732/apps.1500057 Text en © 2015 Chen et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Chen, Wen-Wen
Xiao, Zhen-Zhu
Tong, Xin
Liu, Yu-Pei
Li, Yuan-Yuan
Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title_full Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title_fullStr Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title_full_unstemmed Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title_short Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
title_sort development and characterization of 25 microsatellite primers for ilex chinensis (aquifoliaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4610312/
https://www.ncbi.nlm.nih.gov/pubmed/26504681
http://dx.doi.org/10.3732/apps.1500057
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