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Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1)
PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic mic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4610312/ https://www.ncbi.nlm.nih.gov/pubmed/26504681 http://dx.doi.org/10.3732/apps.1500057 |
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author | Chen, Wen-Wen Xiao, Zhen-Zhu Tong, Xin Liu, Yu-Pei Li, Yuan-Yuan |
author_facet | Chen, Wen-Wen Xiao, Zhen-Zhu Tong, Xin Liu, Yu-Pei Li, Yuan-Yuan |
author_sort | Chen, Wen-Wen |
collection | PubMed |
description | PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic microsatellite markers were developed. Ten polymorphic loci were characterized by 87 individuals sampled from three populations located in Zhejiang Province and Shanghai, China. The number of alleles per locus varied from two to 12. The observed and expected heterozygosities were 0.0435–0.9032 and 0.3121–0.8343, respectively. CONCLUSIONS: These microsatellite markers can be useful for further genetic studies of I. chinensis populations, and so contribute to forest restoration and management. |
format | Online Article Text |
id | pubmed-4610312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-46103122015-10-26 Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) Chen, Wen-Wen Xiao, Zhen-Zhu Tong, Xin Liu, Yu-Pei Li, Yuan-Yuan Appl Plant Sci Primer Note PREMISE OF THE STUDY: To evaluate genetic variation and structure of Ilex chinensis (Aquifoliaceae), a dioecious evergreen tree, we developed 25 microsatellite markers from its nuclear genome. METHODS AND RESULTS: Based on the biotin-streptavidin capture method, 10 polymorphic and 15 monomorphic microsatellite markers were developed. Ten polymorphic loci were characterized by 87 individuals sampled from three populations located in Zhejiang Province and Shanghai, China. The number of alleles per locus varied from two to 12. The observed and expected heterozygosities were 0.0435–0.9032 and 0.3121–0.8343, respectively. CONCLUSIONS: These microsatellite markers can be useful for further genetic studies of I. chinensis populations, and so contribute to forest restoration and management. Botanical Society of America 2015-10-14 /pmc/articles/PMC4610312/ /pubmed/26504681 http://dx.doi.org/10.3732/apps.1500057 Text en © 2015 Chen et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Chen, Wen-Wen Xiao, Zhen-Zhu Tong, Xin Liu, Yu-Pei Li, Yuan-Yuan Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title | Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title_full | Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title_fullStr | Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title_full_unstemmed | Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title_short | Development and characterization of 25 microsatellite primers for Ilex chinensis (Aquifoliaceae)(1) |
title_sort | development and characterization of 25 microsatellite primers for ilex chinensis (aquifoliaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4610312/ https://www.ncbi.nlm.nih.gov/pubmed/26504681 http://dx.doi.org/10.3732/apps.1500057 |
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