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Automatic Quantification of Microvessels Using Unsupervised Image Analysis
An automatic method for quantification of images of microvessels by computing area proportions and number of objects is presented. The objects are segmented from the background using dynamic thresholding of the average component size histogram. To be able to count the objects, fragmented objects are...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
IOS Press
1998
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611099/ https://www.ncbi.nlm.nih.gov/pubmed/10052632 http://dx.doi.org/10.1155/1998/490585 |
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author | Ranefall, Petter Wester, Kenneth Busch, Christer Malmström, Per-Uno Bengtsson, Ewert |
author_facet | Ranefall, Petter Wester, Kenneth Busch, Christer Malmström, Per-Uno Bengtsson, Ewert |
author_sort | Ranefall, Petter |
collection | PubMed |
description | An automatic method for quantification of images of microvessels by computing area proportions and number of objects is presented. The objects are segmented from the background using dynamic thresholding of the average component size histogram. To be able to count the objects, fragmented objects are connected, all objects are filled, and touching objects are separated using a watershed segmentation algorithm. The method is fully automatic and robust with respect to illumination and focus settings. A test set consisting of images grabbed with different focus and illumination for each field of view, was used to test the method, and the proposed method showed less variation than the intraoperator variation using manual threshold. Further, the method showed good correlation to manual object counting (r = 0.80) on an other test set. |
format | Online Article Text |
id | pubmed-4611099 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 1998 |
publisher | IOS Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-46110992016-01-12 Automatic Quantification of Microvessels Using Unsupervised Image Analysis Ranefall, Petter Wester, Kenneth Busch, Christer Malmström, Per-Uno Bengtsson, Ewert Anal Cell Pathol Other An automatic method for quantification of images of microvessels by computing area proportions and number of objects is presented. The objects are segmented from the background using dynamic thresholding of the average component size histogram. To be able to count the objects, fragmented objects are connected, all objects are filled, and touching objects are separated using a watershed segmentation algorithm. The method is fully automatic and robust with respect to illumination and focus settings. A test set consisting of images grabbed with different focus and illumination for each field of view, was used to test the method, and the proposed method showed less variation than the intraoperator variation using manual threshold. Further, the method showed good correlation to manual object counting (r = 0.80) on an other test set. IOS Press 1998 1998-01-01 /pmc/articles/PMC4611099/ /pubmed/10052632 http://dx.doi.org/10.1155/1998/490585 Text en Copyright © 1998 Hindawi Publishing Corporation. |
spellingShingle | Other Ranefall, Petter Wester, Kenneth Busch, Christer Malmström, Per-Uno Bengtsson, Ewert Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title | Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title_full | Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title_fullStr | Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title_full_unstemmed | Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title_short | Automatic Quantification of Microvessels Using Unsupervised Image Analysis |
title_sort | automatic quantification of microvessels using unsupervised image analysis |
topic | Other |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611099/ https://www.ncbi.nlm.nih.gov/pubmed/10052632 http://dx.doi.org/10.1155/1998/490585 |
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