Cargando…

An Automated Method for the Quantification and Fractal Analysis of Immunostaining

Aims. In tissue counter analysis (TCA) digital images of complex histologic sections are dissected into elements of equal size and shape, and digital information comprising grey level, colour and texture features is calculated for each element. In this study we assessed the feasibility of TCA for th...

Descripción completa

Detalles Bibliográficos
Autores principales: Gerger, Armin, Bergthaler, Patrick, Smolle, Josef
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2004
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611126/
https://www.ncbi.nlm.nih.gov/pubmed/15371648
http://dx.doi.org/10.1155/2004/241921
_version_ 1782396058156924928
author Gerger, Armin
Bergthaler, Patrick
Smolle, Josef
author_facet Gerger, Armin
Bergthaler, Patrick
Smolle, Josef
author_sort Gerger, Armin
collection PubMed
description Aims. In tissue counter analysis (TCA) digital images of complex histologic sections are dissected into elements of equal size and shape, and digital information comprising grey level, colour and texture features is calculated for each element. In this study we assessed the feasibility of TCA for the quantitative description of amount and also of distribution of immunostained material. Methods. In a first step, our system was trained for differentiating between background and tissue on the one hand and between immunopositive and so‐called other tissue on the other. In a second step, immunostained slides were automatically screened and the procedure was tested for the quantitative description of amount of cytokeratin (CK) and leukocyte common antigen (LCA) immunopositive structures. Additionally, fractal analysis was applied to all cases describing the architectural distribution of immunostained material. Results. The procedure yielded reproducible assessments of the relative amounts of immunopositive tissue components when the number and percentage of CK and LCA stained structures was assessed. Furthermore, a reliable classification of immunopositive patterns was found by means of fractal dimensionality. Conclusions. Tissue counter analysis combined with classification trees and fractal analysis is a fully automated and reproducible approach for the quantitative description in immunohistology.
format Online
Article
Text
id pubmed-4611126
institution National Center for Biotechnology Information
language English
publishDate 2004
publisher IOS Press
record_format MEDLINE/PubMed
spelling pubmed-46111262016-01-12 An Automated Method for the Quantification and Fractal Analysis of Immunostaining Gerger, Armin Bergthaler, Patrick Smolle, Josef Cell Oncol Other Aims. In tissue counter analysis (TCA) digital images of complex histologic sections are dissected into elements of equal size and shape, and digital information comprising grey level, colour and texture features is calculated for each element. In this study we assessed the feasibility of TCA for the quantitative description of amount and also of distribution of immunostained material. Methods. In a first step, our system was trained for differentiating between background and tissue on the one hand and between immunopositive and so‐called other tissue on the other. In a second step, immunostained slides were automatically screened and the procedure was tested for the quantitative description of amount of cytokeratin (CK) and leukocyte common antigen (LCA) immunopositive structures. Additionally, fractal analysis was applied to all cases describing the architectural distribution of immunostained material. Results. The procedure yielded reproducible assessments of the relative amounts of immunopositive tissue components when the number and percentage of CK and LCA stained structures was assessed. Furthermore, a reliable classification of immunopositive patterns was found by means of fractal dimensionality. Conclusions. Tissue counter analysis combined with classification trees and fractal analysis is a fully automated and reproducible approach for the quantitative description in immunohistology. IOS Press 2004 2004-07-26 /pmc/articles/PMC4611126/ /pubmed/15371648 http://dx.doi.org/10.1155/2004/241921 Text en Copyright © 2004 Hindawi Publishing Corporation and the authors.
spellingShingle Other
Gerger, Armin
Bergthaler, Patrick
Smolle, Josef
An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title_full An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title_fullStr An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title_full_unstemmed An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title_short An Automated Method for the Quantification and Fractal Analysis of Immunostaining
title_sort automated method for the quantification and fractal analysis of immunostaining
topic Other
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611126/
https://www.ncbi.nlm.nih.gov/pubmed/15371648
http://dx.doi.org/10.1155/2004/241921
work_keys_str_mv AT gergerarmin anautomatedmethodforthequantificationandfractalanalysisofimmunostaining
AT bergthalerpatrick anautomatedmethodforthequantificationandfractalanalysisofimmunostaining
AT smollejosef anautomatedmethodforthequantificationandfractalanalysisofimmunostaining
AT gergerarmin automatedmethodforthequantificationandfractalanalysisofimmunostaining
AT bergthalerpatrick automatedmethodforthequantificationandfractalanalysisofimmunostaining
AT smollejosef automatedmethodforthequantificationandfractalanalysisofimmunostaining