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Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition
Evaluation of morphological changes in cells is an integral part of study on epithelial to mesenchymal transition (EMT), however, only a few papers reported the changes in quantitative parameters and no article compared different parameters for demanding better parameters. In the study, the purpose...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4613694/ https://www.ncbi.nlm.nih.gov/pubmed/26182364 http://dx.doi.org/10.1042/BSR20150070 |
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author | Ren, Zhou-Xin Yu, Hai-Bin Li, Jian-Sheng Shen, Jun-Ling Du, Wen-Sen |
author_facet | Ren, Zhou-Xin Yu, Hai-Bin Li, Jian-Sheng Shen, Jun-Ling Du, Wen-Sen |
author_sort | Ren, Zhou-Xin |
collection | PubMed |
description | Evaluation of morphological changes in cells is an integral part of study on epithelial to mesenchymal transition (EMT), however, only a few papers reported the changes in quantitative parameters and no article compared different parameters for demanding better parameters. In the study, the purpose was to investigate suitable parameters for quantitative evaluation of EMT morphological changes. A549 human lung adenocarcinoma cell line was selected for the study. Some cells were stimulated by transforming growth factor-β1 (TGF-β1) for EMT, and other cells were as control without TGF-β1 stimulation. Subsequently, cells were placed in phase contrast microscope and three arbitrary fields were captured and saved with a personal computer. Using the tools of Photoshop software, some cells in an image were selected, segmented out and exchanged into unique hue, and other part in the image was shifted into another unique hue. The cells were calculated with 29 morphological parameters by Image Pro Plus software. A parameter between cells with or without TGF-β1 stimulation was compared statistically and nine parameters were significantly different between them. Receiver operating characteristic curve (ROC curve) of a parameter was described with SPSS software and F-test was used to compare two areas under the curves (AUCs) in Excel. Among them, roundness and radius ratio were the most AUCs and were significant higher than the other parameters. The results provided a new method with quantitative assessment of cell morphology during EMT, and found out two parameters, roundness and radius ratio, as suitable for quantification. |
format | Online Article Text |
id | pubmed-4613694 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-46136942016-09-13 Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition Ren, Zhou-Xin Yu, Hai-Bin Li, Jian-Sheng Shen, Jun-Ling Du, Wen-Sen Biosci Rep Original Papers Evaluation of morphological changes in cells is an integral part of study on epithelial to mesenchymal transition (EMT), however, only a few papers reported the changes in quantitative parameters and no article compared different parameters for demanding better parameters. In the study, the purpose was to investigate suitable parameters for quantitative evaluation of EMT morphological changes. A549 human lung adenocarcinoma cell line was selected for the study. Some cells were stimulated by transforming growth factor-β1 (TGF-β1) for EMT, and other cells were as control without TGF-β1 stimulation. Subsequently, cells were placed in phase contrast microscope and three arbitrary fields were captured and saved with a personal computer. Using the tools of Photoshop software, some cells in an image were selected, segmented out and exchanged into unique hue, and other part in the image was shifted into another unique hue. The cells were calculated with 29 morphological parameters by Image Pro Plus software. A parameter between cells with or without TGF-β1 stimulation was compared statistically and nine parameters were significantly different between them. Receiver operating characteristic curve (ROC curve) of a parameter was described with SPSS software and F-test was used to compare two areas under the curves (AUCs) in Excel. Among them, roundness and radius ratio were the most AUCs and were significant higher than the other parameters. The results provided a new method with quantitative assessment of cell morphology during EMT, and found out two parameters, roundness and radius ratio, as suitable for quantification. Portland Press Ltd. 2015-06-11 /pmc/articles/PMC4613694/ /pubmed/26182364 http://dx.doi.org/10.1042/BSR20150070 Text en © 2015 Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article published by Portland Press Limited and distributed under the Creative Commons Attribution Licence 3.0 (http://creativecommons.org/licenses/by/3.0/) . |
spellingShingle | Original Papers Ren, Zhou-Xin Yu, Hai-Bin Li, Jian-Sheng Shen, Jun-Ling Du, Wen-Sen Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title | Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title_full | Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title_fullStr | Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title_full_unstemmed | Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title_short | Suitable parameter choice on quantitative morphology of A549 cell in epithelial–mesenchymal transition |
title_sort | suitable parameter choice on quantitative morphology of a549 cell in epithelial–mesenchymal transition |
topic | Original Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4613694/ https://www.ncbi.nlm.nih.gov/pubmed/26182364 http://dx.doi.org/10.1042/BSR20150070 |
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