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Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population
Single-nucleotide polymorphisms (SNPs) in microRNAs (miRNAs) have been suggested to influence the occurrence and progression of cancer through altering the expression and biological function of miRNAs. The aim of this study was to investigate whether the potential functional SNPs in MIR196A2 promote...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer Health
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4616385/ https://www.ncbi.nlm.nih.gov/pubmed/25474430 http://dx.doi.org/10.1097/MD.0000000000000173 |
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author | Xu, Ming Qiang, Fulin Gao, Yan Kang, Meiyun Wang, Meilin Tao, Guoquan Gong, Weida Zhu, Haixia Wu, Dongmei Zhang, Zhengdong Zhao, Qinghong |
author_facet | Xu, Ming Qiang, Fulin Gao, Yan Kang, Meiyun Wang, Meilin Tao, Guoquan Gong, Weida Zhu, Haixia Wu, Dongmei Zhang, Zhengdong Zhao, Qinghong |
author_sort | Xu, Ming |
collection | PubMed |
description | Single-nucleotide polymorphisms (SNPs) in microRNAs (miRNAs) have been suggested to influence the occurrence and progression of cancer through altering the expression and biological function of miRNAs. The aim of this study was to investigate whether the potential functional SNPs in MIR196A2 promoter had effect on the susceptibility to gastric cancer (GC) in a Chinese population. We conducted a 2-stage case–control study (753 cases and 854 controls in testing set; 940 cases and 1061 controls in validation set) to evaluate the association between 2 potential functional SNPs in MIR196A2 promoter (rs12304647 A>C and rs35010275 G>C) and GC risk. The luciferase reporter assay and electrophoretic mobility shift assay were used to examine the functionality of the important polymorphism. We found that the rs35010275 C allele was significantly associated with the decreased risk of GC (adjusted odds ratio = 0.85, 95% confidence interval = 0.77–0.94) in the combined case–control studies. The miR-196a expression levels in GC tissues were significantly higher than that in corresponding adjacent normal tissues (P < 0.001). Besides, each allele of rs35010275 displayed completely opposite effects to influence the transcription activity of MIR196A2 promoter via recruiting different transcription factors or complexes. The functional rs35010275 G>C polymorphism in MIR196A2 promoter was significantly associated with miR-196a expression and influenced the genetic susceptibility to GC. |
format | Online Article Text |
id | pubmed-4616385 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Wolters Kluwer Health |
record_format | MEDLINE/PubMed |
spelling | pubmed-46163852015-10-27 Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population Xu, Ming Qiang, Fulin Gao, Yan Kang, Meiyun Wang, Meilin Tao, Guoquan Gong, Weida Zhu, Haixia Wu, Dongmei Zhang, Zhengdong Zhao, Qinghong Medicine (Baltimore) 4400 Single-nucleotide polymorphisms (SNPs) in microRNAs (miRNAs) have been suggested to influence the occurrence and progression of cancer through altering the expression and biological function of miRNAs. The aim of this study was to investigate whether the potential functional SNPs in MIR196A2 promoter had effect on the susceptibility to gastric cancer (GC) in a Chinese population. We conducted a 2-stage case–control study (753 cases and 854 controls in testing set; 940 cases and 1061 controls in validation set) to evaluate the association between 2 potential functional SNPs in MIR196A2 promoter (rs12304647 A>C and rs35010275 G>C) and GC risk. The luciferase reporter assay and electrophoretic mobility shift assay were used to examine the functionality of the important polymorphism. We found that the rs35010275 C allele was significantly associated with the decreased risk of GC (adjusted odds ratio = 0.85, 95% confidence interval = 0.77–0.94) in the combined case–control studies. The miR-196a expression levels in GC tissues were significantly higher than that in corresponding adjacent normal tissues (P < 0.001). Besides, each allele of rs35010275 displayed completely opposite effects to influence the transcription activity of MIR196A2 promoter via recruiting different transcription factors or complexes. The functional rs35010275 G>C polymorphism in MIR196A2 promoter was significantly associated with miR-196a expression and influenced the genetic susceptibility to GC. Wolters Kluwer Health 2014-12-05 /pmc/articles/PMC4616385/ /pubmed/25474430 http://dx.doi.org/10.1097/MD.0000000000000173 Text en © 2014 Wolters Kluwer Health | Lippincott Williams & Wilkins http://creativecommons.org/licenses/by-nc/4.0 This is an open access article distributed under the Creative Commons Attribution-NonCommercial License, where it is permissible to download, share and reproduce the work in any medium, provided it is properly cited. The work cannot be used commercially. http://creativecommons.org/licenses/by-nc/4.0 |
spellingShingle | 4400 Xu, Ming Qiang, Fulin Gao, Yan Kang, Meiyun Wang, Meilin Tao, Guoquan Gong, Weida Zhu, Haixia Wu, Dongmei Zhang, Zhengdong Zhao, Qinghong Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title | Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title_full | Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title_fullStr | Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title_full_unstemmed | Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title_short | Evaluation of a Novel Functional Single-Nucleotide Polymorphism (rs35010275 G>C) in MIR196A2 Promoter Region as a Risk Factor of Gastric Cancer in a Chinese Population |
title_sort | evaluation of a novel functional single-nucleotide polymorphism (rs35010275 g>c) in mir196a2 promoter region as a risk factor of gastric cancer in a chinese population |
topic | 4400 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4616385/ https://www.ncbi.nlm.nih.gov/pubmed/25474430 http://dx.doi.org/10.1097/MD.0000000000000173 |
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