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Molecular and functional evolution of the fungal diterpene synthase genes

BACKGROUND: Terpenes represent one of the largest and most diversified families of natural compounds and are used in numerous industrial applications. Terpene synthase (TPS) genes originated in bacteria as diterpene synthase (di-TPS) genes. They are also found in plant and fungal genomes. The recent...

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Autores principales: Fischer, Marc JC, Rustenhloz, Camille, Leh-Louis, Véronique, Perrière, Guy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617483/
https://www.ncbi.nlm.nih.gov/pubmed/26483054
http://dx.doi.org/10.1186/s12866-015-0564-8
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author Fischer, Marc JC
Rustenhloz, Camille
Leh-Louis, Véronique
Perrière, Guy
author_facet Fischer, Marc JC
Rustenhloz, Camille
Leh-Louis, Véronique
Perrière, Guy
author_sort Fischer, Marc JC
collection PubMed
description BACKGROUND: Terpenes represent one of the largest and most diversified families of natural compounds and are used in numerous industrial applications. Terpene synthase (TPS) genes originated in bacteria as diterpene synthase (di-TPS) genes. They are also found in plant and fungal genomes. The recent availability of a large number of fungal genomes represents an opportunity to investigate how genes involved in diterpene synthesis were acquired by fungi, and to assess the consequences of this process on the fungal metabolism. RESULTS: In order to investigate the origin of fungal di-TPS, we implemented a search for potential fungal di-TPS genes and identified their presence in several unrelated Ascomycota and Basidiomycota species. The fungal di-TPS phylogenetic tree is function-related but is not associated with the phylogeny based on housekeeping genes. The lack of agreement between fungal and di-TPS-based phylogenies suggests the presence of Horizontal Gene Transfer (HGTs) events. Further evidence for HGT was provided by conservation of synteny of di-TPS and neighbouring genes in distantly related fungi. CONCLUSIONS: The results obtained here suggest that fungal di-TPSs originated from an ancient HGT event of a single di-TPS gene from a plant to a fungus in Ascomycota. In fungi, these di-TPSs allowed for the formation of clusters consisting in di-TPS, GGPPS and P450 genes to create functional clusters that were transferred between fungal species, producing diterpenes acting as hormones or toxins, thus affecting fungal development and pathogenicity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12866-015-0564-8) contains supplementary material, which is available to authorized users.
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spelling pubmed-46174832015-10-24 Molecular and functional evolution of the fungal diterpene synthase genes Fischer, Marc JC Rustenhloz, Camille Leh-Louis, Véronique Perrière, Guy BMC Microbiol Research Article BACKGROUND: Terpenes represent one of the largest and most diversified families of natural compounds and are used in numerous industrial applications. Terpene synthase (TPS) genes originated in bacteria as diterpene synthase (di-TPS) genes. They are also found in plant and fungal genomes. The recent availability of a large number of fungal genomes represents an opportunity to investigate how genes involved in diterpene synthesis were acquired by fungi, and to assess the consequences of this process on the fungal metabolism. RESULTS: In order to investigate the origin of fungal di-TPS, we implemented a search for potential fungal di-TPS genes and identified their presence in several unrelated Ascomycota and Basidiomycota species. The fungal di-TPS phylogenetic tree is function-related but is not associated with the phylogeny based on housekeeping genes. The lack of agreement between fungal and di-TPS-based phylogenies suggests the presence of Horizontal Gene Transfer (HGTs) events. Further evidence for HGT was provided by conservation of synteny of di-TPS and neighbouring genes in distantly related fungi. CONCLUSIONS: The results obtained here suggest that fungal di-TPSs originated from an ancient HGT event of a single di-TPS gene from a plant to a fungus in Ascomycota. In fungi, these di-TPSs allowed for the formation of clusters consisting in di-TPS, GGPPS and P450 genes to create functional clusters that were transferred between fungal species, producing diterpenes acting as hormones or toxins, thus affecting fungal development and pathogenicity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12866-015-0564-8) contains supplementary material, which is available to authorized users. BioMed Central 2015-10-19 /pmc/articles/PMC4617483/ /pubmed/26483054 http://dx.doi.org/10.1186/s12866-015-0564-8 Text en © Fischer et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Fischer, Marc JC
Rustenhloz, Camille
Leh-Louis, Véronique
Perrière, Guy
Molecular and functional evolution of the fungal diterpene synthase genes
title Molecular and functional evolution of the fungal diterpene synthase genes
title_full Molecular and functional evolution of the fungal diterpene synthase genes
title_fullStr Molecular and functional evolution of the fungal diterpene synthase genes
title_full_unstemmed Molecular and functional evolution of the fungal diterpene synthase genes
title_short Molecular and functional evolution of the fungal diterpene synthase genes
title_sort molecular and functional evolution of the fungal diterpene synthase genes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617483/
https://www.ncbi.nlm.nih.gov/pubmed/26483054
http://dx.doi.org/10.1186/s12866-015-0564-8
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