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Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation
Four broodstocks of European huchen (Hucho hucho) from: Poland, Germany, Slovakia, and Ukraine were investigated using ten microsatellite DNA loci. Microsatellite DNA analysis was successfully applied for the first time in the Polish broodstock of this fish species. The genetic variation and genetic...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617857/ https://www.ncbi.nlm.nih.gov/pubmed/25743021 http://dx.doi.org/10.1007/s13353-015-0274-9 |
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author | Kucinski, M. Fopp-Bayat, D. Liszewski, T. Svinger, V. W. Lebeda, I. Kolman, R. |
author_facet | Kucinski, M. Fopp-Bayat, D. Liszewski, T. Svinger, V. W. Lebeda, I. Kolman, R. |
author_sort | Kucinski, M. |
collection | PubMed |
description | Four broodstocks of European huchen (Hucho hucho) from: Poland, Germany, Slovakia, and Ukraine were investigated using ten microsatellite DNA loci. Microsatellite DNA analysis was successfully applied for the first time in the Polish broodstock of this fish species. The genetic variation and genetic distance between these broodstocks were evaluated. In addition, we examined the potential effects of a genetic bottleneck on the genetic variation of the broodstocks. The European huchen broodstocks exhibited moderate genetic diversity (PIC = 0.405–0.496 and I = 0.831–1.047) with the exception of German broodstock which presented higher genetic diversity (PIC = 0.590 and I = 1.254). Observed (Ho) and expected (He) heterozygosity across the investigated loci in all broodstocks ranged from 0.434 to 0.686 and from 0.452 to 0.650, respectively. Overall, the studied broodstocks were in Hardy-Weinberg equilibrium (HWE); however, from 8 to 42 % of the loci deviated from HWE in each stock. The Garza-Williamson index (M = 0.146–0.279) and values of the heterozygosity excess revealed a reduction of genetic variation in all studied broodstocks because of the founder or bottleneck effect. The analysis of genetic differentiation (Fst) and Nei’s genetic distance between pairs of broodstocks revealed that Polish and Ukrainian broodstocks of European huchen were characterized by the closest genetic distance. In contrast, the highest genetic divergence parameters (Fst and Nei’s distance) were observed among German, Slovak, and Ukrainian broodstocks. |
format | Online Article Text |
id | pubmed-4617857 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-46178572015-10-28 Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation Kucinski, M. Fopp-Bayat, D. Liszewski, T. Svinger, V. W. Lebeda, I. Kolman, R. J Appl Genet Animal Genetics • Original Paper Four broodstocks of European huchen (Hucho hucho) from: Poland, Germany, Slovakia, and Ukraine were investigated using ten microsatellite DNA loci. Microsatellite DNA analysis was successfully applied for the first time in the Polish broodstock of this fish species. The genetic variation and genetic distance between these broodstocks were evaluated. In addition, we examined the potential effects of a genetic bottleneck on the genetic variation of the broodstocks. The European huchen broodstocks exhibited moderate genetic diversity (PIC = 0.405–0.496 and I = 0.831–1.047) with the exception of German broodstock which presented higher genetic diversity (PIC = 0.590 and I = 1.254). Observed (Ho) and expected (He) heterozygosity across the investigated loci in all broodstocks ranged from 0.434 to 0.686 and from 0.452 to 0.650, respectively. Overall, the studied broodstocks were in Hardy-Weinberg equilibrium (HWE); however, from 8 to 42 % of the loci deviated from HWE in each stock. The Garza-Williamson index (M = 0.146–0.279) and values of the heterozygosity excess revealed a reduction of genetic variation in all studied broodstocks because of the founder or bottleneck effect. The analysis of genetic differentiation (Fst) and Nei’s genetic distance between pairs of broodstocks revealed that Polish and Ukrainian broodstocks of European huchen were characterized by the closest genetic distance. In contrast, the highest genetic divergence parameters (Fst and Nei’s distance) were observed among German, Slovak, and Ukrainian broodstocks. Springer Berlin Heidelberg 2015-03-06 2015 /pmc/articles/PMC4617857/ /pubmed/25743021 http://dx.doi.org/10.1007/s13353-015-0274-9 Text en © The Author(s) 2015 https://creativecommons.org/licenses/by/4.0/ Open Access This article is distributed under the terms of the Creative Commons Attribution License which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. |
spellingShingle | Animal Genetics • Original Paper Kucinski, M. Fopp-Bayat, D. Liszewski, T. Svinger, V. W. Lebeda, I. Kolman, R. Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title | Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title_full | Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title_fullStr | Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title_full_unstemmed | Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title_short | Genetic analysis of four European huchen (Hucho hucho Linnaeus, 1758) broodstocks from Poland, Germany, Slovakia, and Ukraine: implication for conservation |
title_sort | genetic analysis of four european huchen (hucho hucho linnaeus, 1758) broodstocks from poland, germany, slovakia, and ukraine: implication for conservation |
topic | Animal Genetics • Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617857/ https://www.ncbi.nlm.nih.gov/pubmed/25743021 http://dx.doi.org/10.1007/s13353-015-0274-9 |
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