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Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests

Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additiona...

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Autores principales: Pacheco, Luis G. C., Mattos-Guaraldi, Ana L., Santos, Carolina S., Veras, Adonney A. O., Guimarães, Luis C., Abreu, Vinícius, Pereira, Felipe L., Soares, Siomar C., Dorella, Fernanda A., Carvalho, Alex F., Leal, Carlos G., Figueiredo, Henrique C. P., Ramos, Juliana N., Vieira, Veronica V., Farfour, Eric, Guiso, Nicole, Hirata, Raphael, Azevedo, Vasco, Silva, Artur, Ramos, Rommel T. J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618292/
https://www.ncbi.nlm.nih.gov/pubmed/26516374
http://dx.doi.org/10.7150/jgen.12886
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author Pacheco, Luis G. C.
Mattos-Guaraldi, Ana L.
Santos, Carolina S.
Veras, Adonney A. O.
Guimarães, Luis C.
Abreu, Vinícius
Pereira, Felipe L.
Soares, Siomar C.
Dorella, Fernanda A.
Carvalho, Alex F.
Leal, Carlos G.
Figueiredo, Henrique C. P.
Ramos, Juliana N.
Vieira, Veronica V.
Farfour, Eric
Guiso, Nicole
Hirata, Raphael
Azevedo, Vasco
Silva, Artur
Ramos, Rommel T. J.
author_facet Pacheco, Luis G. C.
Mattos-Guaraldi, Ana L.
Santos, Carolina S.
Veras, Adonney A. O.
Guimarães, Luis C.
Abreu, Vinícius
Pereira, Felipe L.
Soares, Siomar C.
Dorella, Fernanda A.
Carvalho, Alex F.
Leal, Carlos G.
Figueiredo, Henrique C. P.
Ramos, Juliana N.
Vieira, Veronica V.
Farfour, Eric
Guiso, Nicole
Hirata, Raphael
Azevedo, Vasco
Silva, Artur
Ramos, Rommel T. J.
author_sort Pacheco, Luis G. C.
collection PubMed
description Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additional molecular methods. Herein, we present the annotated draft genome sequences of two isolates of “difficult-to-identify” human-pathogenic corynebacterial species: C. xerosis and C. minutissimum. The genome sequences of ca. 2.7 Mbp, with a mean number of 2,580 protein encoding genes, were also compared with the publicly available genome sequences of strains of C. amycolatum and C. striatum. These results will aid the exploration of novel biochemical reactions to improve existing identification tests as well as the development of more accurate molecular identification methods through detection of species-specific target genes for isolate's identification or drug susceptibility profiling.
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spelling pubmed-46182922015-10-29 Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests Pacheco, Luis G. C. Mattos-Guaraldi, Ana L. Santos, Carolina S. Veras, Adonney A. O. Guimarães, Luis C. Abreu, Vinícius Pereira, Felipe L. Soares, Siomar C. Dorella, Fernanda A. Carvalho, Alex F. Leal, Carlos G. Figueiredo, Henrique C. P. Ramos, Juliana N. Vieira, Veronica V. Farfour, Eric Guiso, Nicole Hirata, Raphael Azevedo, Vasco Silva, Artur Ramos, Rommel T. J. J Genomics Short Research Communication Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additional molecular methods. Herein, we present the annotated draft genome sequences of two isolates of “difficult-to-identify” human-pathogenic corynebacterial species: C. xerosis and C. minutissimum. The genome sequences of ca. 2.7 Mbp, with a mean number of 2,580 protein encoding genes, were also compared with the publicly available genome sequences of strains of C. amycolatum and C. striatum. These results will aid the exploration of novel biochemical reactions to improve existing identification tests as well as the development of more accurate molecular identification methods through detection of species-specific target genes for isolate's identification or drug susceptibility profiling. Ivyspring International Publisher 2015-08-01 /pmc/articles/PMC4618292/ /pubmed/26516374 http://dx.doi.org/10.7150/jgen.12886 Text en © 2015 Ivyspring International Publisher. Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. See http://ivyspring.com/terms for terms and conditions.
spellingShingle Short Research Communication
Pacheco, Luis G. C.
Mattos-Guaraldi, Ana L.
Santos, Carolina S.
Veras, Adonney A. O.
Guimarães, Luis C.
Abreu, Vinícius
Pereira, Felipe L.
Soares, Siomar C.
Dorella, Fernanda A.
Carvalho, Alex F.
Leal, Carlos G.
Figueiredo, Henrique C. P.
Ramos, Juliana N.
Vieira, Veronica V.
Farfour, Eric
Guiso, Nicole
Hirata, Raphael
Azevedo, Vasco
Silva, Artur
Ramos, Rommel T. J.
Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title_full Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title_fullStr Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title_full_unstemmed Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title_short Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
title_sort draft genome sequences of two species of “difficult-to-identify” human-pathogenic corynebacteria: implications for better identification tests
topic Short Research Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618292/
https://www.ncbi.nlm.nih.gov/pubmed/26516374
http://dx.doi.org/10.7150/jgen.12886
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