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Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests
Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additiona...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618292/ https://www.ncbi.nlm.nih.gov/pubmed/26516374 http://dx.doi.org/10.7150/jgen.12886 |
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author | Pacheco, Luis G. C. Mattos-Guaraldi, Ana L. Santos, Carolina S. Veras, Adonney A. O. Guimarães, Luis C. Abreu, Vinícius Pereira, Felipe L. Soares, Siomar C. Dorella, Fernanda A. Carvalho, Alex F. Leal, Carlos G. Figueiredo, Henrique C. P. Ramos, Juliana N. Vieira, Veronica V. Farfour, Eric Guiso, Nicole Hirata, Raphael Azevedo, Vasco Silva, Artur Ramos, Rommel T. J. |
author_facet | Pacheco, Luis G. C. Mattos-Guaraldi, Ana L. Santos, Carolina S. Veras, Adonney A. O. Guimarães, Luis C. Abreu, Vinícius Pereira, Felipe L. Soares, Siomar C. Dorella, Fernanda A. Carvalho, Alex F. Leal, Carlos G. Figueiredo, Henrique C. P. Ramos, Juliana N. Vieira, Veronica V. Farfour, Eric Guiso, Nicole Hirata, Raphael Azevedo, Vasco Silva, Artur Ramos, Rommel T. J. |
author_sort | Pacheco, Luis G. C. |
collection | PubMed |
description | Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additional molecular methods. Herein, we present the annotated draft genome sequences of two isolates of “difficult-to-identify” human-pathogenic corynebacterial species: C. xerosis and C. minutissimum. The genome sequences of ca. 2.7 Mbp, with a mean number of 2,580 protein encoding genes, were also compared with the publicly available genome sequences of strains of C. amycolatum and C. striatum. These results will aid the exploration of novel biochemical reactions to improve existing identification tests as well as the development of more accurate molecular identification methods through detection of species-specific target genes for isolate's identification or drug susceptibility profiling. |
format | Online Article Text |
id | pubmed-4618292 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-46182922015-10-29 Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests Pacheco, Luis G. C. Mattos-Guaraldi, Ana L. Santos, Carolina S. Veras, Adonney A. O. Guimarães, Luis C. Abreu, Vinícius Pereira, Felipe L. Soares, Siomar C. Dorella, Fernanda A. Carvalho, Alex F. Leal, Carlos G. Figueiredo, Henrique C. P. Ramos, Juliana N. Vieira, Veronica V. Farfour, Eric Guiso, Nicole Hirata, Raphael Azevedo, Vasco Silva, Artur Ramos, Rommel T. J. J Genomics Short Research Communication Non-diphtheriae Corynebacterium species have been increasingly recognized as the causative agents of infections in humans. Differential identification of these bacteria in the clinical microbiology laboratory by the most commonly used biochemical tests is challenging, and normally requires additional molecular methods. Herein, we present the annotated draft genome sequences of two isolates of “difficult-to-identify” human-pathogenic corynebacterial species: C. xerosis and C. minutissimum. The genome sequences of ca. 2.7 Mbp, with a mean number of 2,580 protein encoding genes, were also compared with the publicly available genome sequences of strains of C. amycolatum and C. striatum. These results will aid the exploration of novel biochemical reactions to improve existing identification tests as well as the development of more accurate molecular identification methods through detection of species-specific target genes for isolate's identification or drug susceptibility profiling. Ivyspring International Publisher 2015-08-01 /pmc/articles/PMC4618292/ /pubmed/26516374 http://dx.doi.org/10.7150/jgen.12886 Text en © 2015 Ivyspring International Publisher. Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. See http://ivyspring.com/terms for terms and conditions. |
spellingShingle | Short Research Communication Pacheco, Luis G. C. Mattos-Guaraldi, Ana L. Santos, Carolina S. Veras, Adonney A. O. Guimarães, Luis C. Abreu, Vinícius Pereira, Felipe L. Soares, Siomar C. Dorella, Fernanda A. Carvalho, Alex F. Leal, Carlos G. Figueiredo, Henrique C. P. Ramos, Juliana N. Vieira, Veronica V. Farfour, Eric Guiso, Nicole Hirata, Raphael Azevedo, Vasco Silva, Artur Ramos, Rommel T. J. Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title | Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title_full | Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title_fullStr | Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title_full_unstemmed | Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title_short | Draft Genome Sequences of Two Species of “Difficult-to-Identify” Human-Pathogenic Corynebacteria: Implications for Better Identification Tests |
title_sort | draft genome sequences of two species of “difficult-to-identify” human-pathogenic corynebacteria: implications for better identification tests |
topic | Short Research Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4618292/ https://www.ncbi.nlm.nih.gov/pubmed/26516374 http://dx.doi.org/10.7150/jgen.12886 |
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