Cargando…

Intracellular Information Processing through Encoding and Decoding of Dynamic Signaling Features

Cell signaling dynamics and transcriptional regulatory activities are variable within specific cell types responding to an identical stimulus. In addition to studying the network interactions, there is much interest in utilizing single cell scale data to elucidate the non-random aspects of the varia...

Descripción completa

Detalles Bibliográficos
Autores principales:	Makadia, Hirenkumar K., Schwaber, James S., Vadigepalli, Rajanikanth
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2015
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619640/ https://www.ncbi.nlm.nih.gov/pubmed/26491963 http://dx.doi.org/10.1371/journal.pcbi.1004563

Ejemplares similares

Input-output signal processing plasticity of vagal motor neurons in response to cardiac ischemic injury
por: Gorky, Jonathan, et al.
Publicado: (2021)

Mapping the little brain at the heart by an interdisciplinary systems biology team
por: Vadigepalli, Rajanikanth, et al.
Publicado: (2021)

Robust dynamic balance of AP-1 transcription factors in a neuronal gene regulatory network
por: Miller, Gregory M, et al.
Publicado: (2010)

A data-driven modeling approach to identify disease-specific multi-organ networks driving physiological dysregulation
por: Anderson, Warren D., et al.
Publicado: (2017)

Investigating the Effects of Brainstem Neuronal Adaptation on Cardiovascular Homeostasis
por: Park, James H., et al.
Publicado: (2020)

Systems analysis of circadian time-dependent neuronal epidermal growth factor receptor signaling
por: Zak, Daniel E, et al.
Publicado: (2006)

Single Cell Scale Neuronal and Glial Gene Expression and Putative Cell Phenotypes and Networks in the Nucleus Tractus Solitarius in an Alcohol Withdrawal Time Series
por: O’Sullivan, Sean J., et al.
Publicado: (2021)

Integrative Gene Regulatory Network Analysis Reveals Light-Induced Regional Gene Expression Phase Shift Programs in the Mouse Suprachiasmatic Nucleus
por: Zhu, Haisun, et al.
Publicado: (2012)

Inputs drive cell phenotype variability
por: Park, James, et al.
Publicado: (2014)

Elucidating the Mechanisms of Dynamic and Robust Control of the Liver Homeostatic Renewal Process: Cell Network Modeling and Analysis
por: Cook, Daniel, et al.
Publicado: (2023)

Single-Cell Transcriptional Analysis Reveals Novel Neuronal Phenotypes and Interaction Networks Involved in the Central Circadian Clock
por: Park, James, et al.
Publicado: (2016)

Temporal changes in innate immune signals in a rat model of alcohol withdrawal in emotional and cardiorespiratory homeostatic nuclei
por: Freeman, Kate, et al.
Publicado: (2012)

Diurnal Patterns of Gene Expression in the Dorsal Vagal Complex and the Central Nucleus of the Amygdala – Non-rhythm-generating Brain Regions
por: Staehle, Mary M., et al.
Publicado: (2020)

Structured neuronal encoding and decoding of human speech features
por: Tankus, Ariel, et al.
Publicado: (2012)

Model-based virtual patient analysis of human liver regeneration predicts critical perioperative factors controlling the dynamic mode of response to resection
por: Verma, Babita K., et al.
Publicado: (2019)

Driver drowsiness estimation using EEG signals with a dynamical encoder–decoder modeling framework
por: Arefnezhad, Sadegh, et al.
Publicado: (2022)

A rationally engineered decoder of transient intracellular signals
por: Lormeau, Claude, et al.
Publicado: (2021)

Encoding and decoding spatio-temporal information for super-resolution microscopy
por: Lanzanò, Luca, et al.
Publicado: (2015)

Single-Cell Glia and Neuron Gene Expression in the Central Amygdala in Opioid Withdrawal Suggests Inflammation With Correlated Gut Dysbiosis
por: O’Sullivan, Sean J., et al.
Publicado: (2019)

Decoding Musical Training from Dynamic Processing of Musical Features in the Brain
por: Saari, Pasi, et al.
Publicado: (2018)

Encoding, transmission, decoding, and specificity of calcium signals in plants
por: Allan, Claudia, et al.
Publicado: (2022)

Encoding and Decoding of p53 Dynamics in Cellular Response to Stresses
por: Wang, Ping, et al.
Publicado: (2023)

Distributed information encoding and decoding using self-organized spatial patterns
por: Lu, Jia, et al.
Publicado: (2022)

NF-kB in Signaling Patterns and Its Temporal Dynamics Encode/Decode Human Diseases
por: Almowallad, Sanaa, et al.
Publicado: (2022)

SPSNet: subpopulation-sensitive network-based analysis of heterogeneous gene expression data
por: Belorkar, Abha, et al.
Publicado: (2018)

Decoding auditory spatial and emotional information encoding using multivariate versus univariate techniques
por: Kryklywy, James H., et al.
Publicado: (2018)

An Encoder–Decoder Architecture within a Classical Signal-Processing Framework for Real-Time Barcode Segmentation
por: Gómez-Cárdenes, Óscar, et al.
Publicado: (2023)

A novel comparative pattern analysis approach identifies chronic alcohol mediated dysregulation of transcriptomic dynamics during liver regeneration
por: Kuttippurathu, Lakshmi, et al.
Publicado: (2016)

Systems analysis of non-parenchymal cell modulation of liver repair across multiple regeneration modes
por: Cook, Daniel, et al.
Publicado: (2015)

Temporal and functional profile of the transcriptional regulatory network in the early regenerative response to partial hepatectomy in the rat
por: Juskeviciute, Egle, et al.
Publicado: (2008)

Cellular network modeling and single cell gene expression analysis reveals novel hepatic stellate cell phenotypes controlling liver regeneration dynamics
por: Cook, Daniel, et al.
Publicado: (2018)

Causality Analysis and Cell Network Modeling of Spatial Calcium Signaling Patterns in Liver Lobules
por: Verma, Aalap, et al.
Publicado: (2018)

microRNA-Mediated Encoding and Decoding of Time-Dependent Signals in Tumorigenesis
por: Tealdi, Simone, et al.
Publicado: (2022)

Auxiliary signal-guided knowledge encoder-decoder for medical report generation
por: Li, Mingjie, et al.
Publicado: (2022)

A novel, dynamic pattern-based analysis of NF-κB binding during the priming phase of liver regeneration reveals switch-like functional regulation of target genes
por: Cook, Daniel J., et al.
Publicado: (2015)

Encoding and Decoding Models in Cognitive Electrophysiology
por: Holdgraf, Christopher R., et al.
Publicado: (2017)

Correction to: Rethinking Image Inpainting via a Mutual Encoder-Decoder with Feature Equalizations
por: Liu, Hongyu, et al.
Publicado: (2020)

Information Processing and Integration with Intracellular Dynamics Near Critical Point
por: Kamimura, Atsushi, et al.
Publicado: (2012)

Possibility of information encoding/decoding using the memory effect in fractional-order capacitive devices
por: Allagui, Anis, et al.
Publicado: (2021)

Quantifying information accumulation encoded in the dynamics of biochemical signaling
por: Tang, Ying, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_vkhif0dkk8vi1c7a81a4mj1ve3