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Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA

Cancer starts when cells in a part of the body start to grow out of control. In fact cells become cancer cells because of DNA damage. A DNA walk of a genome represents how the frequency of each nucleotide of a pairing nucleotide couple changes locally. In this research in order to study the cancer g...

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Detalles Bibliográficos
Autores principales: Namazi, Hamidreza, Kiminezhadmalaie, Mona
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619900/
https://www.ncbi.nlm.nih.gov/pubmed/26539245
http://dx.doi.org/10.1155/2015/242695
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author Namazi, Hamidreza
Kiminezhadmalaie, Mona
author_facet Namazi, Hamidreza
Kiminezhadmalaie, Mona
author_sort Namazi, Hamidreza
collection PubMed
description Cancer starts when cells in a part of the body start to grow out of control. In fact cells become cancer cells because of DNA damage. A DNA walk of a genome represents how the frequency of each nucleotide of a pairing nucleotide couple changes locally. In this research in order to study the cancer genes, DNA walk plots of genomes of patients with lung cancer were generated using a program written in MATLAB language. The data so obtained was checked for fractal property by computing the fractal dimension using a program written in MATLAB. Also, the correlation of damaged DNA was studied using the Hurst exponent measure. We have found that the damaged DNA sequences are exhibiting higher degree of fractality and less correlation compared with normal DNA sequences. So we confirmed this method can be used for early detection of lung cancer. The method introduced in this research not only is useful for diagnosis of lung cancer but also can be applied for detection and growth analysis of different types of cancers.
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spelling pubmed-46199002015-11-04 Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA Namazi, Hamidreza Kiminezhadmalaie, Mona Comput Math Methods Med Research Article Cancer starts when cells in a part of the body start to grow out of control. In fact cells become cancer cells because of DNA damage. A DNA walk of a genome represents how the frequency of each nucleotide of a pairing nucleotide couple changes locally. In this research in order to study the cancer genes, DNA walk plots of genomes of patients with lung cancer were generated using a program written in MATLAB language. The data so obtained was checked for fractal property by computing the fractal dimension using a program written in MATLAB. Also, the correlation of damaged DNA was studied using the Hurst exponent measure. We have found that the damaged DNA sequences are exhibiting higher degree of fractality and less correlation compared with normal DNA sequences. So we confirmed this method can be used for early detection of lung cancer. The method introduced in this research not only is useful for diagnosis of lung cancer but also can be applied for detection and growth analysis of different types of cancers. Hindawi Publishing Corporation 2015 2015-10-11 /pmc/articles/PMC4619900/ /pubmed/26539245 http://dx.doi.org/10.1155/2015/242695 Text en Copyright © 2015 H. Namazi and M. Kiminezhadmalaie. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Namazi, Hamidreza
Kiminezhadmalaie, Mona
Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title_full Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title_fullStr Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title_full_unstemmed Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title_short Diagnosis of Lung Cancer by Fractal Analysis of Damaged DNA
title_sort diagnosis of lung cancer by fractal analysis of damaged dna
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619900/
https://www.ncbi.nlm.nih.gov/pubmed/26539245
http://dx.doi.org/10.1155/2015/242695
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