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Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays

Plant responses to major environmental stressors, such as insect feeding, not only occur via the functions of defense genes but also involve a series of regulatory factors. Our previous transcriptome studies proposed that, in addition to two defense-related genes, GmVSPβ and GmN:IFR, a high proporti...

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Autores principales: Wang, Yongli, Wang, Hui, Ma, Yujie, Du, Haiping, Yang, Qing, Yu, Deyue
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4621403/
https://www.ncbi.nlm.nih.gov/pubmed/26579162
http://dx.doi.org/10.3389/fpls.2015.00915
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author Wang, Yongli
Wang, Hui
Ma, Yujie
Du, Haiping
Yang, Qing
Yu, Deyue
author_facet Wang, Yongli
Wang, Hui
Ma, Yujie
Du, Haiping
Yang, Qing
Yu, Deyue
author_sort Wang, Yongli
collection PubMed
description Plant responses to major environmental stressors, such as insect feeding, not only occur via the functions of defense genes but also involve a series of regulatory factors. Our previous transcriptome studies proposed that, in addition to two defense-related genes, GmVSPβ and GmN:IFR, a high proportion of transcription factors (TFs) participate in the incompatible soybean-common cutworm interaction networks. However, the regulatory mechanisms and effects of these TFs on those induced defense-related genes remain unknown. In the present work, we isolated and identified 12 genes encoding MYB, WRKY, NAC, bZIP, and DREB TFs from a common cutworm-induced cDNA library of a resistant soybean line. Sequence analysis of the promoters of three co-expressed genes, including GmVSPα, GmVSPβ, and GmN:IFR, revealed the enrichment of various TF-binding sites for defense and stress responses. To further identify the regulatory nodes composed of these TFs and defense gene promoters, we performed extensive transient co-transactivation assays to directly test the transcriptional activity of the 12 TFs binding at different levels to the three co-expressed gene promoters. The results showed that all 12 TFs were able to transactivate the GmVSPβ and GmN:IFR promoters. GmbZIP110 and GmMYB75 functioned as distinct regulators of GmVSPα/β and GmN:IFR expression, respectively, while GmWRKY39 acted as a common central regulator of GmVSPα/β and GmN:IFR expression. These corresponding TFs play crucial roles in coordinated plant defense regulation, which provides valuable information for understanding the molecular mechanisms involved in insect-induced transcriptional regulation in soybean. More importantly, the identified TFs and suitable promoters can be used to engineer insect-resistant plants in molecular breeding studies.
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spelling pubmed-46214032015-11-17 Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays Wang, Yongli Wang, Hui Ma, Yujie Du, Haiping Yang, Qing Yu, Deyue Front Plant Sci Plant Science Plant responses to major environmental stressors, such as insect feeding, not only occur via the functions of defense genes but also involve a series of regulatory factors. Our previous transcriptome studies proposed that, in addition to two defense-related genes, GmVSPβ and GmN:IFR, a high proportion of transcription factors (TFs) participate in the incompatible soybean-common cutworm interaction networks. However, the regulatory mechanisms and effects of these TFs on those induced defense-related genes remain unknown. In the present work, we isolated and identified 12 genes encoding MYB, WRKY, NAC, bZIP, and DREB TFs from a common cutworm-induced cDNA library of a resistant soybean line. Sequence analysis of the promoters of three co-expressed genes, including GmVSPα, GmVSPβ, and GmN:IFR, revealed the enrichment of various TF-binding sites for defense and stress responses. To further identify the regulatory nodes composed of these TFs and defense gene promoters, we performed extensive transient co-transactivation assays to directly test the transcriptional activity of the 12 TFs binding at different levels to the three co-expressed gene promoters. The results showed that all 12 TFs were able to transactivate the GmVSPβ and GmN:IFR promoters. GmbZIP110 and GmMYB75 functioned as distinct regulators of GmVSPα/β and GmN:IFR expression, respectively, while GmWRKY39 acted as a common central regulator of GmVSPα/β and GmN:IFR expression. These corresponding TFs play crucial roles in coordinated plant defense regulation, which provides valuable information for understanding the molecular mechanisms involved in insect-induced transcriptional regulation in soybean. More importantly, the identified TFs and suitable promoters can be used to engineer insect-resistant plants in molecular breeding studies. Frontiers Media S.A. 2015-10-27 /pmc/articles/PMC4621403/ /pubmed/26579162 http://dx.doi.org/10.3389/fpls.2015.00915 Text en Copyright © 2015 Wang, Wang, Ma, Du, Yang and Yu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Wang, Yongli
Wang, Hui
Ma, Yujie
Du, Haiping
Yang, Qing
Yu, Deyue
Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title_full Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title_fullStr Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title_full_unstemmed Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title_short Identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
title_sort identification of transcriptional regulatory nodes in soybean defense networks using transient co-transactivation assays
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4621403/
https://www.ncbi.nlm.nih.gov/pubmed/26579162
http://dx.doi.org/10.3389/fpls.2015.00915
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