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VBioindex: A Visual Tool to Estimate Biodiversity

Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non...

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Detalles Bibliográficos
Autores principales: Yu, Dong Su, Yoo, Seung Hwa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623447/
https://www.ncbi.nlm.nih.gov/pubmed/26525645
http://dx.doi.org/10.5808/GI.2015.13.3.90
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author Yu, Dong Su
Yoo, Seung Hwa
author_facet Yu, Dong Su
Yoo, Seung Hwa
author_sort Yu, Dong Su
collection PubMed
description Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non-governmental organizations, thereby drawing a substantial amount of international attention. In the fields of biological research, biodiversity is widely measured using traditional statistical indices such as the Shannon-Wiener index, species richness, evenness, and relative dominance of species. However, some biologists and ecologists have difficulty using these indices because they require advanced mathematical knowledge and computational techniques. Therefore, we developed VBioindex, a user-friendly program that is capable of measuring the Shannon-Wiener index, species richness, evenness, and relative dominance. VBioindex serves as an easy to use interface and visually represents the results in the form of a simple chart and in addition, VBioindex offers functions for long-term investigations of datasets using time-series analyses.
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spelling pubmed-46234472015-10-30 VBioindex: A Visual Tool to Estimate Biodiversity Yu, Dong Su Yoo, Seung Hwa Genomics Inform Application Note Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non-governmental organizations, thereby drawing a substantial amount of international attention. In the fields of biological research, biodiversity is widely measured using traditional statistical indices such as the Shannon-Wiener index, species richness, evenness, and relative dominance of species. However, some biologists and ecologists have difficulty using these indices because they require advanced mathematical knowledge and computational techniques. Therefore, we developed VBioindex, a user-friendly program that is capable of measuring the Shannon-Wiener index, species richness, evenness, and relative dominance. VBioindex serves as an easy to use interface and visually represents the results in the form of a simple chart and in addition, VBioindex offers functions for long-term investigations of datasets using time-series analyses. Korea Genome Organization 2015-09 2015-09-30 /pmc/articles/PMC4623447/ /pubmed/26525645 http://dx.doi.org/10.5808/GI.2015.13.3.90 Text en Copyright © 2015 by the Korea Genome Organization http://creativecommons.org/licenses/by-nc/4.0/ It is identical to the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/).
spellingShingle Application Note
Yu, Dong Su
Yoo, Seung Hwa
VBioindex: A Visual Tool to Estimate Biodiversity
title VBioindex: A Visual Tool to Estimate Biodiversity
title_full VBioindex: A Visual Tool to Estimate Biodiversity
title_fullStr VBioindex: A Visual Tool to Estimate Biodiversity
title_full_unstemmed VBioindex: A Visual Tool to Estimate Biodiversity
title_short VBioindex: A Visual Tool to Estimate Biodiversity
title_sort vbioindex: a visual tool to estimate biodiversity
topic Application Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623447/
https://www.ncbi.nlm.nih.gov/pubmed/26525645
http://dx.doi.org/10.5808/GI.2015.13.3.90
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