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VBioindex: A Visual Tool to Estimate Biodiversity
Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korea Genome Organization
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623447/ https://www.ncbi.nlm.nih.gov/pubmed/26525645 http://dx.doi.org/10.5808/GI.2015.13.3.90 |
_version_ | 1782397684719550464 |
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author | Yu, Dong Su Yoo, Seung Hwa |
author_facet | Yu, Dong Su Yoo, Seung Hwa |
author_sort | Yu, Dong Su |
collection | PubMed |
description | Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non-governmental organizations, thereby drawing a substantial amount of international attention. In the fields of biological research, biodiversity is widely measured using traditional statistical indices such as the Shannon-Wiener index, species richness, evenness, and relative dominance of species. However, some biologists and ecologists have difficulty using these indices because they require advanced mathematical knowledge and computational techniques. Therefore, we developed VBioindex, a user-friendly program that is capable of measuring the Shannon-Wiener index, species richness, evenness, and relative dominance. VBioindex serves as an easy to use interface and visually represents the results in the form of a simple chart and in addition, VBioindex offers functions for long-term investigations of datasets using time-series analyses. |
format | Online Article Text |
id | pubmed-4623447 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Korea Genome Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-46234472015-10-30 VBioindex: A Visual Tool to Estimate Biodiversity Yu, Dong Su Yoo, Seung Hwa Genomics Inform Application Note Biological diversity, also known as biodiversity, is an important criterion for measuring the value of an ecosystem. As biodiversity is closely related to human welfare and quality of life, many efforts to restore and maintain the biodiversity of species have been made by government agencies and non-governmental organizations, thereby drawing a substantial amount of international attention. In the fields of biological research, biodiversity is widely measured using traditional statistical indices such as the Shannon-Wiener index, species richness, evenness, and relative dominance of species. However, some biologists and ecologists have difficulty using these indices because they require advanced mathematical knowledge and computational techniques. Therefore, we developed VBioindex, a user-friendly program that is capable of measuring the Shannon-Wiener index, species richness, evenness, and relative dominance. VBioindex serves as an easy to use interface and visually represents the results in the form of a simple chart and in addition, VBioindex offers functions for long-term investigations of datasets using time-series analyses. Korea Genome Organization 2015-09 2015-09-30 /pmc/articles/PMC4623447/ /pubmed/26525645 http://dx.doi.org/10.5808/GI.2015.13.3.90 Text en Copyright © 2015 by the Korea Genome Organization http://creativecommons.org/licenses/by-nc/4.0/ It is identical to the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/). |
spellingShingle | Application Note Yu, Dong Su Yoo, Seung Hwa VBioindex: A Visual Tool to Estimate Biodiversity |
title | VBioindex: A Visual Tool to Estimate Biodiversity |
title_full | VBioindex: A Visual Tool to Estimate Biodiversity |
title_fullStr | VBioindex: A Visual Tool to Estimate Biodiversity |
title_full_unstemmed | VBioindex: A Visual Tool to Estimate Biodiversity |
title_short | VBioindex: A Visual Tool to Estimate Biodiversity |
title_sort | vbioindex: a visual tool to estimate biodiversity |
topic | Application Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623447/ https://www.ncbi.nlm.nih.gov/pubmed/26525645 http://dx.doi.org/10.5808/GI.2015.13.3.90 |
work_keys_str_mv | AT yudongsu vbioindexavisualtooltoestimatebiodiversity AT yooseunghwa vbioindexavisualtooltoestimatebiodiversity |