Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)

Thioalkalivibrio thiocyanoxidans strain ARh 2(T) is a sulfur-oxidizing bacterium isolated from haloalkaline soda lakes. It is a motile, Gram-negative member of the Gammaproteobacteria. Remarkable properties include the ability to grow on thiocyanate as the sole energy, sulfur and nitrogen source, an...

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Autores principales: Berben, Tom, Sorokin, Dimitry Y., Ivanova, Natalia, Pati, Amrita, Kyrpides, Nikos, Goodwin, Lynne A., Woyke, Tanja, Muyzer, Gerard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4624188/
https://www.ncbi.nlm.nih.gov/pubmed/26512310
http://dx.doi.org/10.1186/s40793-015-0078-x
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author Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
author_facet Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
author_sort Berben, Tom
collection PubMed
description Thioalkalivibrio thiocyanoxidans strain ARh 2(T) is a sulfur-oxidizing bacterium isolated from haloalkaline soda lakes. It is a motile, Gram-negative member of the Gammaproteobacteria. Remarkable properties include the ability to grow on thiocyanate as the sole energy, sulfur and nitrogen source, and the capability of growth at salinities of up to 4.3 M total Na(+). This draft genome sequence consists of 61 scaffolds comprising 2,765,337 bp, and contains 2616 protein-coding and 61 RNA-coding genes. This organism was sequenced as part of the Community Science Program of the DOE Joint Genome Institute.
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spelling pubmed-46241882015-10-29 Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T) Berben, Tom Sorokin, Dimitry Y. Ivanova, Natalia Pati, Amrita Kyrpides, Nikos Goodwin, Lynne A. Woyke, Tanja Muyzer, Gerard Stand Genomic Sci Short Genome Report Thioalkalivibrio thiocyanoxidans strain ARh 2(T) is a sulfur-oxidizing bacterium isolated from haloalkaline soda lakes. It is a motile, Gram-negative member of the Gammaproteobacteria. Remarkable properties include the ability to grow on thiocyanate as the sole energy, sulfur and nitrogen source, and the capability of growth at salinities of up to 4.3 M total Na(+). This draft genome sequence consists of 61 scaffolds comprising 2,765,337 bp, and contains 2616 protein-coding and 61 RNA-coding genes. This organism was sequenced as part of the Community Science Program of the DOE Joint Genome Institute. BioMed Central 2015-10-26 /pmc/articles/PMC4624188/ /pubmed/26512310 http://dx.doi.org/10.1186/s40793-015-0078-x Text en © Berben et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Berben, Tom
Sorokin, Dimitry Y.
Ivanova, Natalia
Pati, Amrita
Kyrpides, Nikos
Goodwin, Lynne A.
Woyke, Tanja
Muyzer, Gerard
Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title_full Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title_fullStr Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title_full_unstemmed Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title_short Partial genome sequence of the haloalkaliphilic soda lake bacterium Thioalkalivibrio thiocyanoxidans ARh 2(T)
title_sort partial genome sequence of the haloalkaliphilic soda lake bacterium thioalkalivibrio thiocyanoxidans arh 2(t)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4624188/
https://www.ncbi.nlm.nih.gov/pubmed/26512310
http://dx.doi.org/10.1186/s40793-015-0078-x
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