Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.

Strain FF6(T) was isolated from the cervical abscess of a 4-year-old Senegalese boy, in Dakar, Senegal. MALDI-TOF MS did not provide any identification. This strain exhibited a 95.17% 16S rRNA sequence identity with Necropsobacter rosorum. Using a polyphasic study including phenotypic and genomic an...

Descripción completa

Detalles Bibliográficos
Autores principales: Lo, C.I., Padhamanabhan, R., Fall, B., Sambe-Ba, B., Mediannikov, O., Nguyen, T.-T., Prudent, E., Faye, N., Wade, B., Raoult, D., Fournier, P.-E., Fenollar, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2015
Materias:
New Microbes in Humans
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4625094/
https://www.ncbi.nlm.nih.gov/pubmed/26587237
http://dx.doi.org/10.1016/j.nmni.2015.09.007
_version_ 1782397930191192064
author Lo, C.I.
Padhamanabhan, R.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Nguyen, T.-T.
Prudent, E.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_facet Lo, C.I.
Padhamanabhan, R.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Nguyen, T.-T.
Prudent, E.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_sort Lo, C.I.
collection PubMed
description Strain FF6(T) was isolated from the cervical abscess of a 4-year-old Senegalese boy, in Dakar, Senegal. MALDI-TOF MS did not provide any identification. This strain exhibited a 95.17% 16S rRNA sequence identity with Necropsobacter rosorum. Using a polyphasic study including phenotypic and genomic analyses, strain FF6(T) was an aero-anaerobic Gram-negative cocobacillus, oxidase positive, and exhibited a genome of 2,493,927 bp (1 chromosome but no plasmid) with a G+C content of 46.2% that coded 2,309 protein-coding and 53 RNA genes. On the basis of these data, we propose the creation of Necropsobacter massiliensis sp. nov.
format Online
Article
Text
id pubmed-4625094
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-46250942015-11-19 Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov. Lo, C.I. Padhamanabhan, R. Fall, B. Sambe-Ba, B. Mediannikov, O. Nguyen, T.-T. Prudent, E. Faye, N. Wade, B. Raoult, D. Fournier, P.-E. Fenollar, F. New Microbes New Infect New Microbes in Humans Strain FF6(T) was isolated from the cervical abscess of a 4-year-old Senegalese boy, in Dakar, Senegal. MALDI-TOF MS did not provide any identification. This strain exhibited a 95.17% 16S rRNA sequence identity with Necropsobacter rosorum. Using a polyphasic study including phenotypic and genomic analyses, strain FF6(T) was an aero-anaerobic Gram-negative cocobacillus, oxidase positive, and exhibited a genome of 2,493,927 bp (1 chromosome but no plasmid) with a G+C content of 46.2% that coded 2,309 protein-coding and 53 RNA genes. On the basis of these data, we propose the creation of Necropsobacter massiliensis sp. nov. Elsevier 2015-09-16 /pmc/articles/PMC4625094/ /pubmed/26587237 http://dx.doi.org/10.1016/j.nmni.2015.09.007 Text en © 2015 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle New Microbes in Humans
Lo, C.I.
Padhamanabhan, R.
Fall, B.
Sambe-Ba, B.
Mediannikov, O.
Nguyen, T.-T.
Prudent, E.
Faye, N.
Wade, B.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title_full Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title_fullStr Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title_full_unstemmed Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title_short Noncontiguous finished genome sequence and description of Necropsobacter massiliensis sp. nov.
title_sort noncontiguous finished genome sequence and description of necropsobacter massiliensis sp. nov.
topic New Microbes in Humans
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4625094/
https://www.ncbi.nlm.nih.gov/pubmed/26587237
http://dx.doi.org/10.1016/j.nmni.2015.09.007
work_keys_str_mv AT loci noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT padhamanabhanr noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT fallb noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT sambebab noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT mediannikovo noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT nguyentt noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT prudente noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT fayen noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT wadeb noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT raoultd noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT fournierpe noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov
AT fenollarf noncontiguousfinishedgenomesequenceanddescriptionofnecropsobactermassiliensisspnov

Ejemplares similares