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Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides

Antisense and RNAi-related oligonucleotides have gained attention as laboratory tools and therapeutic agents based on their ability to manipulate biological events in vitro and in vivo. We show that Ca(2+) enrichment of medium (CEM) potentiates the in vitro activity of multiple types of oligonucleot...

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Autores principales: Hori, Shin-ichiro, Yamamoto, Tsuyoshi, Waki, Reiko, Wada, Shunsuke, Wada, Fumito, Noda, Mio, Obika, Satoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627064/
https://www.ncbi.nlm.nih.gov/pubmed/26101258
http://dx.doi.org/10.1093/nar/gkv626
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author Hori, Shin-ichiro
Yamamoto, Tsuyoshi
Waki, Reiko
Wada, Shunsuke
Wada, Fumito
Noda, Mio
Obika, Satoshi
author_facet Hori, Shin-ichiro
Yamamoto, Tsuyoshi
Waki, Reiko
Wada, Shunsuke
Wada, Fumito
Noda, Mio
Obika, Satoshi
author_sort Hori, Shin-ichiro
collection PubMed
description Antisense and RNAi-related oligonucleotides have gained attention as laboratory tools and therapeutic agents based on their ability to manipulate biological events in vitro and in vivo. We show that Ca(2+) enrichment of medium (CEM) potentiates the in vitro activity of multiple types of oligonucleotides, independent of their net charge and modifications, in various cells. In addition, CEM reflects in vivo silencing activity more consistently than conventional transfection methods. Microscopic analysis reveals that CEM provides a subcellular localization pattern of oligonucleotides resembling that obtained by unassisted transfection, but with quantitative improvement. Highly monodispersed nanoparticles ∼100 nm in size are found in Ca(2+)-enriched serum-containing medium regardless of the presence or absence of oligonucleotides. Transmission electron microscopy analysis reveals that the 100-nm particles are in fact an ensemble of much smaller nanoparticles (ϕ ∼ 15 nm). The presence of these nanoparticles is critical for the efficient uptake of various oligonucleotides. In contrast, CEM is ineffective for plasmids, which are readily transfected via the conventional calcium phosphate method. Collectively, CEM enables a more accurate prediction of the systemic activity of therapeutic oligonucleotides, while enhancing the broad usability of oligonucleotides in the laboratory.
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spelling pubmed-46270642015-11-13 Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides Hori, Shin-ichiro Yamamoto, Tsuyoshi Waki, Reiko Wada, Shunsuke Wada, Fumito Noda, Mio Obika, Satoshi Nucleic Acids Res Methods Online Antisense and RNAi-related oligonucleotides have gained attention as laboratory tools and therapeutic agents based on their ability to manipulate biological events in vitro and in vivo. We show that Ca(2+) enrichment of medium (CEM) potentiates the in vitro activity of multiple types of oligonucleotides, independent of their net charge and modifications, in various cells. In addition, CEM reflects in vivo silencing activity more consistently than conventional transfection methods. Microscopic analysis reveals that CEM provides a subcellular localization pattern of oligonucleotides resembling that obtained by unassisted transfection, but with quantitative improvement. Highly monodispersed nanoparticles ∼100 nm in size are found in Ca(2+)-enriched serum-containing medium regardless of the presence or absence of oligonucleotides. Transmission electron microscopy analysis reveals that the 100-nm particles are in fact an ensemble of much smaller nanoparticles (ϕ ∼ 15 nm). The presence of these nanoparticles is critical for the efficient uptake of various oligonucleotides. In contrast, CEM is ineffective for plasmids, which are readily transfected via the conventional calcium phosphate method. Collectively, CEM enables a more accurate prediction of the systemic activity of therapeutic oligonucleotides, while enhancing the broad usability of oligonucleotides in the laboratory. Oxford University Press 2015-10-30 2015-06-22 /pmc/articles/PMC4627064/ /pubmed/26101258 http://dx.doi.org/10.1093/nar/gkv626 Text en © The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methods Online
Hori, Shin-ichiro
Yamamoto, Tsuyoshi
Waki, Reiko
Wada, Shunsuke
Wada, Fumito
Noda, Mio
Obika, Satoshi
Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title_full Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title_fullStr Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title_full_unstemmed Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title_short Ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
title_sort ca(2+) enrichment in culture medium potentiates effect of oligonucleotides
topic Methods Online
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627064/
https://www.ncbi.nlm.nih.gov/pubmed/26101258
http://dx.doi.org/10.1093/nar/gkv626
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