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Neural hypernetwork approach for pulmonary embolism diagnosis
BACKGROUND: Hypernetworks are based on topological simplicial complexes and generalize the concept of two-body relation to many-body relation. Furthermore, Hypernetworks provide a significant generalization of network theory, enabling the integration of relational structure, logic and analytic dynam...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627406/ https://www.ncbi.nlm.nih.gov/pubmed/26515513 http://dx.doi.org/10.1186/s13104-015-1554-5 |
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author | Rucco, Matteo Sousa-Rodrigues, David Merelli, Emanuela Johnson, Jeffrey H Falsetti, Lorenzo Nitti, Cinzia Salvi, Aldo |
author_facet | Rucco, Matteo Sousa-Rodrigues, David Merelli, Emanuela Johnson, Jeffrey H Falsetti, Lorenzo Nitti, Cinzia Salvi, Aldo |
author_sort | Rucco, Matteo |
collection | PubMed |
description | BACKGROUND: Hypernetworks are based on topological simplicial complexes and generalize the concept of two-body relation to many-body relation. Furthermore, Hypernetworks provide a significant generalization of network theory, enabling the integration of relational structure, logic and analytic dynamics. A pulmonary embolism is a blockage of the main artery of the lung or one of its branches, frequently fatal. RESULTS: Our study uses data on 28 diagnostic features of 1427 people considered to be at risk of pulmonary embolism enrolled in the Department of Internal and Subintensive Medicine of an Italian National Hospital “Ospedali Riuniti di Ancona”. Patients arrived in the department after a first screening executed by the emergency room. The resulting neural hypernetwork correctly recognized 94 % of those developing pulmonary embolism. This is better than previous results obtained with other methods (statistical selection of features, partial least squares regression, topological data analysis in a metric space). CONCLUSION: In this work we successfully derived a new integrative approach for the analysis of partial and incomplete datasets that is based on Q-analysis with machine learning. The new approach, called Neural Hypernetwork, has been applied to a case study of pulmonary embolism diagnosis. The novelty of this method is that it does not use clinical parameters extracted by imaging analysis. |
format | Online Article Text |
id | pubmed-4627406 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-46274062015-10-31 Neural hypernetwork approach for pulmonary embolism diagnosis Rucco, Matteo Sousa-Rodrigues, David Merelli, Emanuela Johnson, Jeffrey H Falsetti, Lorenzo Nitti, Cinzia Salvi, Aldo BMC Res Notes Research Article BACKGROUND: Hypernetworks are based on topological simplicial complexes and generalize the concept of two-body relation to many-body relation. Furthermore, Hypernetworks provide a significant generalization of network theory, enabling the integration of relational structure, logic and analytic dynamics. A pulmonary embolism is a blockage of the main artery of the lung or one of its branches, frequently fatal. RESULTS: Our study uses data on 28 diagnostic features of 1427 people considered to be at risk of pulmonary embolism enrolled in the Department of Internal and Subintensive Medicine of an Italian National Hospital “Ospedali Riuniti di Ancona”. Patients arrived in the department after a first screening executed by the emergency room. The resulting neural hypernetwork correctly recognized 94 % of those developing pulmonary embolism. This is better than previous results obtained with other methods (statistical selection of features, partial least squares regression, topological data analysis in a metric space). CONCLUSION: In this work we successfully derived a new integrative approach for the analysis of partial and incomplete datasets that is based on Q-analysis with machine learning. The new approach, called Neural Hypernetwork, has been applied to a case study of pulmonary embolism diagnosis. The novelty of this method is that it does not use clinical parameters extracted by imaging analysis. BioMed Central 2015-10-29 /pmc/articles/PMC4627406/ /pubmed/26515513 http://dx.doi.org/10.1186/s13104-015-1554-5 Text en © Rucco et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Rucco, Matteo Sousa-Rodrigues, David Merelli, Emanuela Johnson, Jeffrey H Falsetti, Lorenzo Nitti, Cinzia Salvi, Aldo Neural hypernetwork approach for pulmonary embolism diagnosis |
title | Neural hypernetwork approach for pulmonary embolism diagnosis |
title_full | Neural hypernetwork approach for pulmonary embolism diagnosis |
title_fullStr | Neural hypernetwork approach for pulmonary embolism diagnosis |
title_full_unstemmed | Neural hypernetwork approach for pulmonary embolism diagnosis |
title_short | Neural hypernetwork approach for pulmonary embolism diagnosis |
title_sort | neural hypernetwork approach for pulmonary embolism diagnosis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627406/ https://www.ncbi.nlm.nih.gov/pubmed/26515513 http://dx.doi.org/10.1186/s13104-015-1554-5 |
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