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Genetic polymorphism study at 15 autosomal locus in central Indian population

The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India....

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Autores principales: Shrivastava, Pankaj, Jain, Toshi, Trivedi, Veena Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627979/
https://www.ncbi.nlm.nih.gov/pubmed/26543701
http://dx.doi.org/10.1186/s40064-015-1364-1
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author Shrivastava, Pankaj
Jain, Toshi
Trivedi, Veena Ben
author_facet Shrivastava, Pankaj
Jain, Toshi
Trivedi, Veena Ben
author_sort Shrivastava, Pankaj
collection PubMed
description The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India. All locus fall under Hardy–Weinberg equilibrium except TPOX. These STR loci were highly informative and discriminating with combined power of discrimination (CPD) >0.99999. Locus wise allele frequencies of the studied population were compared with the other published populations. Also the Clustering pattern and genetic distance of studied populations is compared and presented with various populations. The studied population showed the genetic proximity with geographically close populations of India and significant genetic variation with distant populations which is also evident by clustering pattern of the NJ tree and the PCA plot.
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spelling pubmed-46279792015-11-05 Genetic polymorphism study at 15 autosomal locus in central Indian population Shrivastava, Pankaj Jain, Toshi Trivedi, Veena Ben Springerplus Database The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India. All locus fall under Hardy–Weinberg equilibrium except TPOX. These STR loci were highly informative and discriminating with combined power of discrimination (CPD) >0.99999. Locus wise allele frequencies of the studied population were compared with the other published populations. Also the Clustering pattern and genetic distance of studied populations is compared and presented with various populations. The studied population showed the genetic proximity with geographically close populations of India and significant genetic variation with distant populations which is also evident by clustering pattern of the NJ tree and the PCA plot. Springer International Publishing 2015-09-30 /pmc/articles/PMC4627979/ /pubmed/26543701 http://dx.doi.org/10.1186/s40064-015-1364-1 Text en © Shrivastava et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Database
Shrivastava, Pankaj
Jain, Toshi
Trivedi, Veena Ben
Genetic polymorphism study at 15 autosomal locus in central Indian population
title Genetic polymorphism study at 15 autosomal locus in central Indian population
title_full Genetic polymorphism study at 15 autosomal locus in central Indian population
title_fullStr Genetic polymorphism study at 15 autosomal locus in central Indian population
title_full_unstemmed Genetic polymorphism study at 15 autosomal locus in central Indian population
title_short Genetic polymorphism study at 15 autosomal locus in central Indian population
title_sort genetic polymorphism study at 15 autosomal locus in central indian population
topic Database
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627979/
https://www.ncbi.nlm.nih.gov/pubmed/26543701
http://dx.doi.org/10.1186/s40064-015-1364-1
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