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Genetic polymorphism study at 15 autosomal locus in central Indian population
The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627979/ https://www.ncbi.nlm.nih.gov/pubmed/26543701 http://dx.doi.org/10.1186/s40064-015-1364-1 |
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author | Shrivastava, Pankaj Jain, Toshi Trivedi, Veena Ben |
author_facet | Shrivastava, Pankaj Jain, Toshi Trivedi, Veena Ben |
author_sort | Shrivastava, Pankaj |
collection | PubMed |
description | The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India. All locus fall under Hardy–Weinberg equilibrium except TPOX. These STR loci were highly informative and discriminating with combined power of discrimination (CPD) >0.99999. Locus wise allele frequencies of the studied population were compared with the other published populations. Also the Clustering pattern and genetic distance of studied populations is compared and presented with various populations. The studied population showed the genetic proximity with geographically close populations of India and significant genetic variation with distant populations which is also evident by clustering pattern of the NJ tree and the PCA plot. |
format | Online Article Text |
id | pubmed-4627979 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-46279792015-11-05 Genetic polymorphism study at 15 autosomal locus in central Indian population Shrivastava, Pankaj Jain, Toshi Trivedi, Veena Ben Springerplus Database The analysis of 15 autosomal STR locus (TH01, D3S1358, vWA, D21S11, TPOX, D7S820, D19S433, D5S818, D2S1338, D16S539, CSF1PO, D13S317, FGA, D18S51, D8S1179) was done in 582 healthy unrelated individuals (Male-366, Female-216) originating from the various geographical regions of Madhya Pradesh, India. All locus fall under Hardy–Weinberg equilibrium except TPOX. These STR loci were highly informative and discriminating with combined power of discrimination (CPD) >0.99999. Locus wise allele frequencies of the studied population were compared with the other published populations. Also the Clustering pattern and genetic distance of studied populations is compared and presented with various populations. The studied population showed the genetic proximity with geographically close populations of India and significant genetic variation with distant populations which is also evident by clustering pattern of the NJ tree and the PCA plot. Springer International Publishing 2015-09-30 /pmc/articles/PMC4627979/ /pubmed/26543701 http://dx.doi.org/10.1186/s40064-015-1364-1 Text en © Shrivastava et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Database Shrivastava, Pankaj Jain, Toshi Trivedi, Veena Ben Genetic polymorphism study at 15 autosomal locus in central Indian population |
title | Genetic polymorphism study at 15 autosomal locus in central Indian population |
title_full | Genetic polymorphism study at 15 autosomal locus in central Indian population |
title_fullStr | Genetic polymorphism study at 15 autosomal locus in central Indian population |
title_full_unstemmed | Genetic polymorphism study at 15 autosomal locus in central Indian population |
title_short | Genetic polymorphism study at 15 autosomal locus in central Indian population |
title_sort | genetic polymorphism study at 15 autosomal locus in central indian population |
topic | Database |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4627979/ https://www.ncbi.nlm.nih.gov/pubmed/26543701 http://dx.doi.org/10.1186/s40064-015-1364-1 |
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