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Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts

BACKGROUND: There are > 80,000 chemicals in commerce with few data available describing their impacts on human health. Biomonitoring surveys, such as the NHANES (National Health and Nutrition Examination Survey), offer one route to identifying possible relationships between environmental chemical...

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Autores principales: Bell, Shannon M., Edwards, Stephen W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Institute of Environmental Health Sciences 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4629746/
https://www.ncbi.nlm.nih.gov/pubmed/25859761
http://dx.doi.org/10.1289/ehp.1409138
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author Bell, Shannon M.
Edwards, Stephen W.
author_facet Bell, Shannon M.
Edwards, Stephen W.
author_sort Bell, Shannon M.
collection PubMed
description BACKGROUND: There are > 80,000 chemicals in commerce with few data available describing their impacts on human health. Biomonitoring surveys, such as the NHANES (National Health and Nutrition Examination Survey), offer one route to identifying possible relationships between environmental chemicals and health impacts, but sparse data and the complexity of traditional models make it difficult to leverage effectively. OBJECTIVE: We describe a workflow to efficiently and comprehensively evaluate and prioritize chemical–health impact relationships from the NHANES biomonitoring survey studies. METHODS: Using a frequent itemset mining (FIM) approach, we identified relationships between chemicals and health biomarkers and diseases. RESULTS: The FIM method identified 7,848 relationships between 219 chemicals and 93 health outcomes/biomarkers. Two case studies used to evaluate the FIM rankings demonstrate that the FIM approach is able to identify published relationships. Because the relationships are derived from the vast majority of the chemicals monitored by NHANES, the resulting list of associations is appropriate for evaluating results from targeted data mining or identifying novel candidate relationships for more detailed investigation. CONCLUSIONS: Because of the computational efficiency of the FIM method, all chemicals and health effects can be considered in a single analysis. The resulting list provides a comprehensive summary of the chemical/health co-occurrences from NHANES that are higher than expected by chance. This information enables ranking and prioritization on chemicals or health effects of interest for evaluation of published results and design of future studies. CITATION: Bell SM, Edwards SW. 2015. Identification and prioritization of relationships between environmental stressors and adverse human health impacts. Environ Health Perspect 123:1193–1199; http://dx.doi.org/10.1289/ehp.1409138
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spelling pubmed-46297462015-11-25 Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts Bell, Shannon M. Edwards, Stephen W. Environ Health Perspect Research BACKGROUND: There are > 80,000 chemicals in commerce with few data available describing their impacts on human health. Biomonitoring surveys, such as the NHANES (National Health and Nutrition Examination Survey), offer one route to identifying possible relationships between environmental chemicals and health impacts, but sparse data and the complexity of traditional models make it difficult to leverage effectively. OBJECTIVE: We describe a workflow to efficiently and comprehensively evaluate and prioritize chemical–health impact relationships from the NHANES biomonitoring survey studies. METHODS: Using a frequent itemset mining (FIM) approach, we identified relationships between chemicals and health biomarkers and diseases. RESULTS: The FIM method identified 7,848 relationships between 219 chemicals and 93 health outcomes/biomarkers. Two case studies used to evaluate the FIM rankings demonstrate that the FIM approach is able to identify published relationships. Because the relationships are derived from the vast majority of the chemicals monitored by NHANES, the resulting list of associations is appropriate for evaluating results from targeted data mining or identifying novel candidate relationships for more detailed investigation. CONCLUSIONS: Because of the computational efficiency of the FIM method, all chemicals and health effects can be considered in a single analysis. The resulting list provides a comprehensive summary of the chemical/health co-occurrences from NHANES that are higher than expected by chance. This information enables ranking and prioritization on chemicals or health effects of interest for evaluation of published results and design of future studies. CITATION: Bell SM, Edwards SW. 2015. Identification and prioritization of relationships between environmental stressors and adverse human health impacts. Environ Health Perspect 123:1193–1199; http://dx.doi.org/10.1289/ehp.1409138 National Institute of Environmental Health Sciences 2015-04-10 2015-11 /pmc/articles/PMC4629746/ /pubmed/25859761 http://dx.doi.org/10.1289/ehp.1409138 Text en http://creativecommons.org/publicdomain/mark/1.0/ Publication of EHP lies in the public domain and is therefore without copyright. All text from EHP may be reprinted freely. Use of materials published in EHP should be acknowledged (for example, “Reproduced with permission from Environmental Health Perspectives”); pertinent reference information should be provided for the article from which the material was reproduced. Articles from EHP, especially the News section, may contain photographs or illustrations copyrighted by other commercial organizations or individuals that may not be used without obtaining prior approval from the holder of the copyright.
spellingShingle Research
Bell, Shannon M.
Edwards, Stephen W.
Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title_full Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title_fullStr Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title_full_unstemmed Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title_short Identification and Prioritization of Relationships between Environmental Stressors and Adverse Human Health Impacts
title_sort identification and prioritization of relationships between environmental stressors and adverse human health impacts
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4629746/
https://www.ncbi.nlm.nih.gov/pubmed/25859761
http://dx.doi.org/10.1289/ehp.1409138
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