Cargando…
The Gap Procedure: for the identification of phylogenetic clusters in HIV-1 sequence data
BACKGROUND: In the context of infectious disease, sequence clustering can be used to provide important insights into the dynamics of transmission. Cluster analysis is usually performed using a phylogenetic approach whereby clusters are assigned on the basis of sufficiently small genetic distances an...
Autores principales: | Vrbik, Irene, Stephens, David A., Roger, Michel, Brenner, Bluma G. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2015
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4634160/ https://www.ncbi.nlm.nih.gov/pubmed/26538192 http://dx.doi.org/10.1186/s12859-015-0791-x |
Ejemplares similares
-
DM-PhyClus: a Bayesian phylogenetic algorithm for infectious disease transmission cluster inference
por: Villandré, Luc, et al.
Publicado: (2018) -
Genotypic and Phylogenetic Insights on Prevention of the Spread of HIV-1 and Drug Resistance in “Real-World” Settings
por: Brenner, Bluma G., et al.
Publicado: (2017) -
Phylogenetic Clustering among Asylum Seekers with New HIV-1 Diagnoses in Montreal, QC, Canada
por: Park, Hyejin, et al.
Publicado: (2021) -
Phylogenetic Insights on Patterns of HIV-1 Spread and the Design of Epidemic Control Measures
por: Brenner, Bluma G.
Publicado: (2022) -
HIV-1 strains belonging to large phylogenetic clusters show accelerated
escape from integrase inhibitors in cell culture compared with viral isolates from
singleton/small clusters
por: Brenner, Bluma G., et al.
Publicado: (2017)