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An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars

In insects, the frequency distribution of the measurements of sclerotized body parts is generally used to classify larval instars and is characterized by a multimodal overlap between instar stages. Nonparametric methods with fixed bandwidths, such as histograms, have significant limitations when use...

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Autores principales: Cen, Guanjun, Yu, Yonghao, Zeng, Xianru, Long, Xiuzhen, Wei, Dewei, Gao, Xuyuan, Zeng, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4635999/
https://www.ncbi.nlm.nih.gov/pubmed/26546689
http://dx.doi.org/10.1093/jisesa/iev136
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author Cen, Guanjun
Yu, Yonghao
Zeng, Xianru
Long, Xiuzhen
Wei, Dewei
Gao, Xuyuan
Zeng, Tao
author_facet Cen, Guanjun
Yu, Yonghao
Zeng, Xianru
Long, Xiuzhen
Wei, Dewei
Gao, Xuyuan
Zeng, Tao
author_sort Cen, Guanjun
collection PubMed
description In insects, the frequency distribution of the measurements of sclerotized body parts is generally used to classify larval instars and is characterized by a multimodal overlap between instar stages. Nonparametric methods with fixed bandwidths, such as histograms, have significant limitations when used to fit this type of distribution, making it difficult to identify divisions between instars. Fixed bandwidths have also been chosen somewhat subjectively in the past, which is another problem. In this study, we describe an adaptive kernel smoothing method to differentiate instars based on discontinuities in the growth rates of sclerotized insect body parts. From Brooks’ rule, we derived a new standard for assessing the quality of instar classification and a bandwidth selector that more accurately reflects the distributed character of specific variables. We used this method to classify the larvae of Austrosimulium tillyardianum (Diptera: Simuliidae) based on five different measurements. Based on head capsule width and head capsule length, the larvae were separated into nine instars. Based on head capsule postoccipital width and mandible length, the larvae were separated into 8 instars and 10 instars, respectively. No reasonable solution was found for antennal segment 3 length. Separation of the larvae into nine instars using head capsule width or head capsule length was most robust and agreed with Crosby’s growth rule. By strengthening the distributed character of the separation variable through the use of variable bandwidths, the adaptive kernel smoothing method could identify divisions between instars more effectively and accurately than previous methods.
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spelling pubmed-46359992015-11-09 An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars Cen, Guanjun Yu, Yonghao Zeng, Xianru Long, Xiuzhen Wei, Dewei Gao, Xuyuan Zeng, Tao J Insect Sci Research In insects, the frequency distribution of the measurements of sclerotized body parts is generally used to classify larval instars and is characterized by a multimodal overlap between instar stages. Nonparametric methods with fixed bandwidths, such as histograms, have significant limitations when used to fit this type of distribution, making it difficult to identify divisions between instars. Fixed bandwidths have also been chosen somewhat subjectively in the past, which is another problem. In this study, we describe an adaptive kernel smoothing method to differentiate instars based on discontinuities in the growth rates of sclerotized insect body parts. From Brooks’ rule, we derived a new standard for assessing the quality of instar classification and a bandwidth selector that more accurately reflects the distributed character of specific variables. We used this method to classify the larvae of Austrosimulium tillyardianum (Diptera: Simuliidae) based on five different measurements. Based on head capsule width and head capsule length, the larvae were separated into nine instars. Based on head capsule postoccipital width and mandible length, the larvae were separated into 8 instars and 10 instars, respectively. No reasonable solution was found for antennal segment 3 length. Separation of the larvae into nine instars using head capsule width or head capsule length was most robust and agreed with Crosby’s growth rule. By strengthening the distributed character of the separation variable through the use of variable bandwidths, the adaptive kernel smoothing method could identify divisions between instars more effectively and accurately than previous methods. Oxford University Press 2015-11-06 /pmc/articles/PMC4635999/ /pubmed/26546689 http://dx.doi.org/10.1093/jisesa/iev136 Text en © The Author 2015. Published by Oxford University Press on behalf of the Entomological Society of America. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research
Cen, Guanjun
Yu, Yonghao
Zeng, Xianru
Long, Xiuzhen
Wei, Dewei
Gao, Xuyuan
Zeng, Tao
An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title_full An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title_fullStr An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title_full_unstemmed An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title_short An Adaptive Kernel Smoothing Method for Classifying Austrosimulium tillyardianum (Diptera: Simuliidae) Larval Instars
title_sort adaptive kernel smoothing method for classifying austrosimulium tillyardianum (diptera: simuliidae) larval instars
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4635999/
https://www.ncbi.nlm.nih.gov/pubmed/26546689
http://dx.doi.org/10.1093/jisesa/iev136
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