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Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters

This paper aims to introduce penalized estimation techniques in clinical investigations of diabetes, as well as to assess their possible advantages and limitations. Data from a previous study was used to carry out the simulations to assess: a) which procedure results in the lowest prediction error o...

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Autores principales: Göbl, Christian S., Bozkurt, Latife, Tura, Andrea, Pacini, Giovanni, Kautzky-Willer, Alexandra, Mittlböck, Martina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636325/
https://www.ncbi.nlm.nih.gov/pubmed/26544569
http://dx.doi.org/10.1371/journal.pone.0141524
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author Göbl, Christian S.
Bozkurt, Latife
Tura, Andrea
Pacini, Giovanni
Kautzky-Willer, Alexandra
Mittlböck, Martina
author_facet Göbl, Christian S.
Bozkurt, Latife
Tura, Andrea
Pacini, Giovanni
Kautzky-Willer, Alexandra
Mittlböck, Martina
author_sort Göbl, Christian S.
collection PubMed
description This paper aims to introduce penalized estimation techniques in clinical investigations of diabetes, as well as to assess their possible advantages and limitations. Data from a previous study was used to carry out the simulations to assess: a) which procedure results in the lowest prediction error of the final model in the setting of a large number of predictor variables with high multicollinearity (of importance if insulin sensitivity should be predicted) and b) which procedure achieves the most accurate estimate of regression coefficients in the setting of fewer predictors with small unidirectional effects and moderate correlation between explanatory variables (of importance if the specific relation between an independent variable and insulin sensitivity should be examined). Moreover a special focus is on the correct direction of estimated parameter effects, a non-negligible source of error and misinterpretation of study results. The simulations were performed for varying sample size to evaluate the performance of LASSO, Ridge as well as different algorithms for Elastic Net. These methods were also compared with automatic variable selection procedures (i.e. optimizing AIC or BIC).We were not able to identify one method achieving superior performance in all situations. However, the improved accuracy of estimated effects underlines the importance of using penalized regression techniques in our example (e.g. if a researcher aims to compare relations of several correlated parameters with insulin sensitivity). However, the decision which procedure should be used depends on the specific context of a study (accuracy versus complexity) and moreover should involve clinical prior knowledge.
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spelling pubmed-46363252015-11-13 Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters Göbl, Christian S. Bozkurt, Latife Tura, Andrea Pacini, Giovanni Kautzky-Willer, Alexandra Mittlböck, Martina PLoS One Research Article This paper aims to introduce penalized estimation techniques in clinical investigations of diabetes, as well as to assess their possible advantages and limitations. Data from a previous study was used to carry out the simulations to assess: a) which procedure results in the lowest prediction error of the final model in the setting of a large number of predictor variables with high multicollinearity (of importance if insulin sensitivity should be predicted) and b) which procedure achieves the most accurate estimate of regression coefficients in the setting of fewer predictors with small unidirectional effects and moderate correlation between explanatory variables (of importance if the specific relation between an independent variable and insulin sensitivity should be examined). Moreover a special focus is on the correct direction of estimated parameter effects, a non-negligible source of error and misinterpretation of study results. The simulations were performed for varying sample size to evaluate the performance of LASSO, Ridge as well as different algorithms for Elastic Net. These methods were also compared with automatic variable selection procedures (i.e. optimizing AIC or BIC).We were not able to identify one method achieving superior performance in all situations. However, the improved accuracy of estimated effects underlines the importance of using penalized regression techniques in our example (e.g. if a researcher aims to compare relations of several correlated parameters with insulin sensitivity). However, the decision which procedure should be used depends on the specific context of a study (accuracy versus complexity) and moreover should involve clinical prior knowledge. Public Library of Science 2015-11-06 /pmc/articles/PMC4636325/ /pubmed/26544569 http://dx.doi.org/10.1371/journal.pone.0141524 Text en © 2015 Göbl et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Göbl, Christian S.
Bozkurt, Latife
Tura, Andrea
Pacini, Giovanni
Kautzky-Willer, Alexandra
Mittlböck, Martina
Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title_full Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title_fullStr Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title_full_unstemmed Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title_short Application of Penalized Regression Techniques in Modelling Insulin Sensitivity by Correlated Metabolic Parameters
title_sort application of penalized regression techniques in modelling insulin sensitivity by correlated metabolic parameters
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636325/
https://www.ncbi.nlm.nih.gov/pubmed/26544569
http://dx.doi.org/10.1371/journal.pone.0141524
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