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Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes

It is well recognized that gene duplication/acquisition is a key factor for molecular evolution, being directly related to the emergence of new genetic variants. The importance of such phenomena can also be expanded to the viral world, with impacts on viral fitness and environmental adaptations. In...

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Autores principales: Boratto, Paulo V. M., Arantes, Thalita S., Silva, Lorena C. F., Assis, Felipe L., Kroon, Erna G., La Scola, Bernard, Abrahão, Jônatas S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4639698/
https://www.ncbi.nlm.nih.gov/pubmed/26635738
http://dx.doi.org/10.3389/fmicb.2015.01256
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author Boratto, Paulo V. M.
Arantes, Thalita S.
Silva, Lorena C. F.
Assis, Felipe L.
Kroon, Erna G.
La Scola, Bernard
Abrahão, Jônatas S.
author_facet Boratto, Paulo V. M.
Arantes, Thalita S.
Silva, Lorena C. F.
Assis, Felipe L.
Kroon, Erna G.
La Scola, Bernard
Abrahão, Jônatas S.
author_sort Boratto, Paulo V. M.
collection PubMed
description It is well recognized that gene duplication/acquisition is a key factor for molecular evolution, being directly related to the emergence of new genetic variants. The importance of such phenomena can also be expanded to the viral world, with impacts on viral fitness and environmental adaptations. In this work we describe the isolation and characterization of Niemeyer virus, a new mimivirus isolate obtained from water samples of an urban lake in Brazil. Genomic data showed that Niemeyer harbors duplicated copies of three of its four aminoacyl-tRNA synthetase genes (cysteinyl, methionyl, and tyrosyl RS). Gene expression analysis showed that such duplications allowed significantly increased expression of methionyl and tyrosyl aaRS mRNA by Niemeyer in comparison to APMV. Remarkably, phylogenetic data revealed that Niemeyer duplicated gene pairs are different, each one clustering with a different group of mimivirus strains. Taken together, our results raise new questions about the origins and selective pressures involving events of aaRS gain and loss among mimiviruses.
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spelling pubmed-46396982015-12-03 Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes Boratto, Paulo V. M. Arantes, Thalita S. Silva, Lorena C. F. Assis, Felipe L. Kroon, Erna G. La Scola, Bernard Abrahão, Jônatas S. Front Microbiol Microbiology It is well recognized that gene duplication/acquisition is a key factor for molecular evolution, being directly related to the emergence of new genetic variants. The importance of such phenomena can also be expanded to the viral world, with impacts on viral fitness and environmental adaptations. In this work we describe the isolation and characterization of Niemeyer virus, a new mimivirus isolate obtained from water samples of an urban lake in Brazil. Genomic data showed that Niemeyer harbors duplicated copies of three of its four aminoacyl-tRNA synthetase genes (cysteinyl, methionyl, and tyrosyl RS). Gene expression analysis showed that such duplications allowed significantly increased expression of methionyl and tyrosyl aaRS mRNA by Niemeyer in comparison to APMV. Remarkably, phylogenetic data revealed that Niemeyer duplicated gene pairs are different, each one clustering with a different group of mimivirus strains. Taken together, our results raise new questions about the origins and selective pressures involving events of aaRS gain and loss among mimiviruses. Frontiers Media S.A. 2015-11-10 /pmc/articles/PMC4639698/ /pubmed/26635738 http://dx.doi.org/10.3389/fmicb.2015.01256 Text en Copyright © 2015 Boratto, Arantes, Silva, Assis, Kroon, La Scola and Abrahão. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Boratto, Paulo V. M.
Arantes, Thalita S.
Silva, Lorena C. F.
Assis, Felipe L.
Kroon, Erna G.
La Scola, Bernard
Abrahão, Jônatas S.
Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title_full Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title_fullStr Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title_full_unstemmed Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title_short Niemeyer Virus: A New Mimivirus Group A Isolate Harboring a Set of Duplicated Aminoacyl-tRNA Synthetase Genes
title_sort niemeyer virus: a new mimivirus group a isolate harboring a set of duplicated aminoacyl-trna synthetase genes
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4639698/
https://www.ncbi.nlm.nih.gov/pubmed/26635738
http://dx.doi.org/10.3389/fmicb.2015.01256
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