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Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg

Due to abundant contamination in various foods, the pathogenesis of Bacillus cereus has been widely studied in physiological and molecular level. B. cereus FORC_005 was isolated from a Korean side dish, soy sauce braised fish-cake with quail-egg in South Korea. While 21 complete genome sequences of...

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Autores principales: Lee, Dong-Hoon, Kim, Hye Rim, Chung, Han Young, Lim, Jong Gyu, Kim, Suyeon, Kim, Se Keun, Ku, Hye-Jin, Kim, Heebal, Ryu, Sangryeol, Choi, Sang Ho, Lee, Ju-Hoon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4642778/
https://www.ncbi.nlm.nih.gov/pubmed/26566422
http://dx.doi.org/10.1186/s40793-015-0094-x
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author Lee, Dong-Hoon
Kim, Hye Rim
Chung, Han Young
Lim, Jong Gyu
Kim, Suyeon
Kim, Se Keun
Ku, Hye-Jin
Kim, Heebal
Ryu, Sangryeol
Choi, Sang Ho
Lee, Ju-Hoon
author_facet Lee, Dong-Hoon
Kim, Hye Rim
Chung, Han Young
Lim, Jong Gyu
Kim, Suyeon
Kim, Se Keun
Ku, Hye-Jin
Kim, Heebal
Ryu, Sangryeol
Choi, Sang Ho
Lee, Ju-Hoon
author_sort Lee, Dong-Hoon
collection PubMed
description Due to abundant contamination in various foods, the pathogenesis of Bacillus cereus has been widely studied in physiological and molecular level. B. cereus FORC_005 was isolated from a Korean side dish, soy sauce braised fish-cake with quail-egg in South Korea. While 21 complete genome sequences of B. cereus has been announced to date, this strain was completely sequenced, analyzed, and compared with other complete genome sequences of B. cereus to elucidate the distinct pathogenic features of a strain isolated in South Korea. The genomic DNA containing a circular chromosome consists of 5,349,617-bp with a GC content of 35.29 %. It was predicted to have 5170 open reading frames, 106 tRNA genes, and 42 rRNA genes. Among the predicted ORFs, 3892 ORFs were annotated to encode functional proteins (75.28 %) and 1278 ORFs were predicted to encode hypothetical proteins (748 conserved and 530 non-conserved hypothetical proteins). This genome information of B. cereus FORC_005 would extend our understanding of its pathogenesis in genomic level for efficient control of its contamination in foods and further food poisoning.
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spelling pubmed-46427782015-11-13 Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg Lee, Dong-Hoon Kim, Hye Rim Chung, Han Young Lim, Jong Gyu Kim, Suyeon Kim, Se Keun Ku, Hye-Jin Kim, Heebal Ryu, Sangryeol Choi, Sang Ho Lee, Ju-Hoon Stand Genomic Sci Short Genome Report Due to abundant contamination in various foods, the pathogenesis of Bacillus cereus has been widely studied in physiological and molecular level. B. cereus FORC_005 was isolated from a Korean side dish, soy sauce braised fish-cake with quail-egg in South Korea. While 21 complete genome sequences of B. cereus has been announced to date, this strain was completely sequenced, analyzed, and compared with other complete genome sequences of B. cereus to elucidate the distinct pathogenic features of a strain isolated in South Korea. The genomic DNA containing a circular chromosome consists of 5,349,617-bp with a GC content of 35.29 %. It was predicted to have 5170 open reading frames, 106 tRNA genes, and 42 rRNA genes. Among the predicted ORFs, 3892 ORFs were annotated to encode functional proteins (75.28 %) and 1278 ORFs were predicted to encode hypothetical proteins (748 conserved and 530 non-conserved hypothetical proteins). This genome information of B. cereus FORC_005 would extend our understanding of its pathogenesis in genomic level for efficient control of its contamination in foods and further food poisoning. BioMed Central 2015-11-11 /pmc/articles/PMC4642778/ /pubmed/26566422 http://dx.doi.org/10.1186/s40793-015-0094-x Text en © Lee et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Lee, Dong-Hoon
Kim, Hye Rim
Chung, Han Young
Lim, Jong Gyu
Kim, Suyeon
Kim, Se Keun
Ku, Hye-Jin
Kim, Heebal
Ryu, Sangryeol
Choi, Sang Ho
Lee, Ju-Hoon
Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title_full Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title_fullStr Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title_full_unstemmed Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title_short Complete genome sequence of Bacillus cereus FORC_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
title_sort complete genome sequence of bacillus cereus forc_005, a food-borne pathogen from the soy sauce braised fish-cake with quail-egg
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4642778/
https://www.ncbi.nlm.nih.gov/pubmed/26566422
http://dx.doi.org/10.1186/s40793-015-0094-x
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