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Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans
Many filamentous fungi produce β-mannan-degrading β-1,4-mannanases that belong to the glycoside hydrolase 5 (GH5) and GH26 families. Here we identified a novel β-1,4-mannanase (Man134A) that belongs to a new glycoside hydrolase (GH) family (GH134) in Aspergillus nidulans. Blast analysis of the amino...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4646033/ https://www.ncbi.nlm.nih.gov/pubmed/26385921 http://dx.doi.org/10.1074/jbc.M115.661645 |
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author | Shimizu, Motoyuki Kaneko, Yuhei Ishihara, Saaya Mochizuki, Mai Sakai, Kiyota Yamada, Miyuki Murata, Shunsuke Itoh, Eriko Yamamoto, Tatsuya Sugimura, Yu Hirano, Tatsuya Takaya, Naoki Kobayashi, Tetsuo Kato, Masashi |
author_facet | Shimizu, Motoyuki Kaneko, Yuhei Ishihara, Saaya Mochizuki, Mai Sakai, Kiyota Yamada, Miyuki Murata, Shunsuke Itoh, Eriko Yamamoto, Tatsuya Sugimura, Yu Hirano, Tatsuya Takaya, Naoki Kobayashi, Tetsuo Kato, Masashi |
author_sort | Shimizu, Motoyuki |
collection | PubMed |
description | Many filamentous fungi produce β-mannan-degrading β-1,4-mannanases that belong to the glycoside hydrolase 5 (GH5) and GH26 families. Here we identified a novel β-1,4-mannanase (Man134A) that belongs to a new glycoside hydrolase (GH) family (GH134) in Aspergillus nidulans. Blast analysis of the amino acid sequence using the NCBI protein database revealed that this enzyme had no similarity to any sequences and no putative conserved domains. Protein homologs of the enzyme were distributed to limited fungal and bacterial species. Man134A released mannobiose (M(2)), mannotriose (M(3)), and mannotetraose (M(4)) but not mannopentaose (M(5)) or higher manno-oligosaccharides when galactose-free β-mannan was the substrate from the initial stage of the reaction, suggesting that Man134A preferentially reacts with β-mannan via a unique catalytic mode. Man134A had high catalytic efficiency (k(cat)/K(m)) toward mannohexaose (M(6)) compared with the endo-β-1,4-mannanase Man5C and notably converted M(6) to M(2), M(3), and M(4), with M(3) being the predominant reaction product. The action of Man5C toward β-mannans was synergistic. The growth phenotype of a Man134A disruptant was poor when β-mannans were the sole carbon source, indicating that Man134A is involved in β-mannan degradation in vivo. These findings indicate a hitherto undiscovered mechanism of β-mannan degradation that is enhanced by the novel β-1,4-mannanase, Man134A, when combined with other mannanolytic enzymes including various endo-β-1,4-mannanases. |
format | Online Article Text |
id | pubmed-4646033 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | American Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-46460332015-11-16 Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans Shimizu, Motoyuki Kaneko, Yuhei Ishihara, Saaya Mochizuki, Mai Sakai, Kiyota Yamada, Miyuki Murata, Shunsuke Itoh, Eriko Yamamoto, Tatsuya Sugimura, Yu Hirano, Tatsuya Takaya, Naoki Kobayashi, Tetsuo Kato, Masashi J Biol Chem Microbiology Many filamentous fungi produce β-mannan-degrading β-1,4-mannanases that belong to the glycoside hydrolase 5 (GH5) and GH26 families. Here we identified a novel β-1,4-mannanase (Man134A) that belongs to a new glycoside hydrolase (GH) family (GH134) in Aspergillus nidulans. Blast analysis of the amino acid sequence using the NCBI protein database revealed that this enzyme had no similarity to any sequences and no putative conserved domains. Protein homologs of the enzyme were distributed to limited fungal and bacterial species. Man134A released mannobiose (M(2)), mannotriose (M(3)), and mannotetraose (M(4)) but not mannopentaose (M(5)) or higher manno-oligosaccharides when galactose-free β-mannan was the substrate from the initial stage of the reaction, suggesting that Man134A preferentially reacts with β-mannan via a unique catalytic mode. Man134A had high catalytic efficiency (k(cat)/K(m)) toward mannohexaose (M(6)) compared with the endo-β-1,4-mannanase Man5C and notably converted M(6) to M(2), M(3), and M(4), with M(3) being the predominant reaction product. The action of Man5C toward β-mannans was synergistic. The growth phenotype of a Man134A disruptant was poor when β-mannans were the sole carbon source, indicating that Man134A is involved in β-mannan degradation in vivo. These findings indicate a hitherto undiscovered mechanism of β-mannan degradation that is enhanced by the novel β-1,4-mannanase, Man134A, when combined with other mannanolytic enzymes including various endo-β-1,4-mannanases. American Society for Biochemistry and Molecular Biology 2015-11-13 2015-09-18 /pmc/articles/PMC4646033/ /pubmed/26385921 http://dx.doi.org/10.1074/jbc.M115.661645 Text en © 2015 by The American Society for Biochemistry and Molecular Biology, Inc. Author's Choice—Final version free via Creative Commons CC-BY license (http://creativecommons.org/licenses/by/4.0) . |
spellingShingle | Microbiology Shimizu, Motoyuki Kaneko, Yuhei Ishihara, Saaya Mochizuki, Mai Sakai, Kiyota Yamada, Miyuki Murata, Shunsuke Itoh, Eriko Yamamoto, Tatsuya Sugimura, Yu Hirano, Tatsuya Takaya, Naoki Kobayashi, Tetsuo Kato, Masashi Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title | Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title_full | Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title_fullStr | Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title_full_unstemmed | Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title_short | Novel β-1,4-Mannanase Belonging to a New Glycoside Hydrolase Family in Aspergillus nidulans |
title_sort | novel β-1,4-mannanase belonging to a new glycoside hydrolase family in aspergillus nidulans |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4646033/ https://www.ncbi.nlm.nih.gov/pubmed/26385921 http://dx.doi.org/10.1074/jbc.M115.661645 |
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