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Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite mar...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651630/ https://www.ncbi.nlm.nih.gov/pubmed/26649266 http://dx.doi.org/10.3732/apps.1500061 |
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author | Grusz, Amanda L. Pryer, Kathleen M. |
author_facet | Grusz, Amanda L. Pryer, Kathleen M. |
author_sort | Grusz, Amanda L. |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite markers were developed. Of these, 14 were polymorphic with up to five alleles per locus and eight markers amplified in one or more congeneric close relatives (M. covillei, M. fendleri, M. aurea, and M. rufa). To demonstrate marker utility, M. lindheimeri samples from three Arizona populations were genotyped at nine loci. For each population, diversity measures including percent polymorphic loci, frequency of heterozygotes across all loci, and genotypic diversity were calculated. Across the three populations, on average, 63% of loci were polymorphic, the average frequency of heterozygotes (across all loci) was 0.32, and average genotypic diversity was 0.34. CONCLUSIONS: These markers provide a foundation for future studies exploring polyploidy and apomixis in myriopterid ferns. |
format | Online Article Text |
id | pubmed-4651630 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-46516302015-12-08 Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) Grusz, Amanda L. Pryer, Kathleen M. Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite markers were developed. Of these, 14 were polymorphic with up to five alleles per locus and eight markers amplified in one or more congeneric close relatives (M. covillei, M. fendleri, M. aurea, and M. rufa). To demonstrate marker utility, M. lindheimeri samples from three Arizona populations were genotyped at nine loci. For each population, diversity measures including percent polymorphic loci, frequency of heterozygotes across all loci, and genotypic diversity were calculated. Across the three populations, on average, 63% of loci were polymorphic, the average frequency of heterozygotes (across all loci) was 0.32, and average genotypic diversity was 0.34. CONCLUSIONS: These markers provide a foundation for future studies exploring polyploidy and apomixis in myriopterid ferns. Botanical Society of America 2015-11-10 /pmc/articles/PMC4651630/ /pubmed/26649266 http://dx.doi.org/10.3732/apps.1500061 Text en © 2015 Grusz and Pryer. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Grusz, Amanda L. Pryer, Kathleen M. Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title | Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title_full | Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title_fullStr | Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title_full_unstemmed | Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title_short | Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) |
title_sort | development of microsatellite markers for the apomictic triploid fern myriopteris lindheimeri (pteridaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651630/ https://www.ncbi.nlm.nih.gov/pubmed/26649266 http://dx.doi.org/10.3732/apps.1500061 |
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