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Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)

PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite mar...

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Autores principales: Grusz, Amanda L., Pryer, Kathleen M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651630/
https://www.ncbi.nlm.nih.gov/pubmed/26649266
http://dx.doi.org/10.3732/apps.1500061
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author Grusz, Amanda L.
Pryer, Kathleen M.
author_facet Grusz, Amanda L.
Pryer, Kathleen M.
author_sort Grusz, Amanda L.
collection PubMed
description PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite markers were developed. Of these, 14 were polymorphic with up to five alleles per locus and eight markers amplified in one or more congeneric close relatives (M. covillei, M. fendleri, M. aurea, and M. rufa). To demonstrate marker utility, M. lindheimeri samples from three Arizona populations were genotyped at nine loci. For each population, diversity measures including percent polymorphic loci, frequency of heterozygotes across all loci, and genotypic diversity were calculated. Across the three populations, on average, 63% of loci were polymorphic, the average frequency of heterozygotes (across all loci) was 0.32, and average genotypic diversity was 0.34. CONCLUSIONS: These markers provide a foundation for future studies exploring polyploidy and apomixis in myriopterid ferns.
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spelling pubmed-46516302015-12-08 Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1) Grusz, Amanda L. Pryer, Kathleen M. Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were developed for investigating the population dynamics of Myriopteris lindheimeri (Pteridaceae), an apomictic triploid fern endemic to deserts of the southwestern United States and Mexico. METHODS AND RESULTS: Using 454 sequencing, 21 microsatellite markers were developed. Of these, 14 were polymorphic with up to five alleles per locus and eight markers amplified in one or more congeneric close relatives (M. covillei, M. fendleri, M. aurea, and M. rufa). To demonstrate marker utility, M. lindheimeri samples from three Arizona populations were genotyped at nine loci. For each population, diversity measures including percent polymorphic loci, frequency of heterozygotes across all loci, and genotypic diversity were calculated. Across the three populations, on average, 63% of loci were polymorphic, the average frequency of heterozygotes (across all loci) was 0.32, and average genotypic diversity was 0.34. CONCLUSIONS: These markers provide a foundation for future studies exploring polyploidy and apomixis in myriopterid ferns. Botanical Society of America 2015-11-10 /pmc/articles/PMC4651630/ /pubmed/26649266 http://dx.doi.org/10.3732/apps.1500061 Text en © 2015 Grusz and Pryer. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Grusz, Amanda L.
Pryer, Kathleen M.
Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title_full Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title_fullStr Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title_full_unstemmed Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title_short Development of microsatellite markers for the apomictic triploid fern Myriopteris lindheimeri (Pteridaceae)(1)
title_sort development of microsatellite markers for the apomictic triploid fern myriopteris lindheimeri (pteridaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651630/
https://www.ncbi.nlm.nih.gov/pubmed/26649266
http://dx.doi.org/10.3732/apps.1500061
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