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DNA-based identification of Calendula officinalis (Asteraceae)(1)

PREMISE OF THE STUDY: For the economically important species Calendula officinalis, a fast identification assay based on high-resolution melting curve analysis was designed. This assay was developed to distinguish C. officinalis from other species of the genus and other Asteraceae genera, and to det...

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Autores principales: Schmiderer, Corinna, Lukas, Brigitte, Ruzicka, Joana, Novak, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651632/
https://www.ncbi.nlm.nih.gov/pubmed/26649268
http://dx.doi.org/10.3732/apps.1500069
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author Schmiderer, Corinna
Lukas, Brigitte
Ruzicka, Joana
Novak, Johannes
author_facet Schmiderer, Corinna
Lukas, Brigitte
Ruzicka, Joana
Novak, Johannes
author_sort Schmiderer, Corinna
collection PubMed
description PREMISE OF THE STUDY: For the economically important species Calendula officinalis, a fast identification assay based on high-resolution melting curve analysis was designed. This assay was developed to distinguish C. officinalis from other species of the genus and other Asteraceae genera, and to detect C. officinalis as an adulterant of saffron samples. METHODS AND RESULTS: For this study, five markers (ITS, rbcL, 5′ trnK-matK, psbA-trnH, trnL-trnF) of 10 Calendula species were sequenced and analyzed for species-specific mutations. With the application of two developed primer pairs located in the trnK 5′ intron and trnL-trnF, C. officinalis could be distinguished from other species of the genus and all outgroup samples tested. Adulterations of Calendula DNA in saffron could be detected down to 0.01%. CONCLUSIONS: With the developed assay, C. officinalis can be reliably identified and admixtures of this species as adulterant of saffron can be revealed at low levels.
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spelling pubmed-46516322015-12-08 DNA-based identification of Calendula officinalis (Asteraceae)(1) Schmiderer, Corinna Lukas, Brigitte Ruzicka, Joana Novak, Johannes Appl Plant Sci Protocol Note PREMISE OF THE STUDY: For the economically important species Calendula officinalis, a fast identification assay based on high-resolution melting curve analysis was designed. This assay was developed to distinguish C. officinalis from other species of the genus and other Asteraceae genera, and to detect C. officinalis as an adulterant of saffron samples. METHODS AND RESULTS: For this study, five markers (ITS, rbcL, 5′ trnK-matK, psbA-trnH, trnL-trnF) of 10 Calendula species were sequenced and analyzed for species-specific mutations. With the application of two developed primer pairs located in the trnK 5′ intron and trnL-trnF, C. officinalis could be distinguished from other species of the genus and all outgroup samples tested. Adulterations of Calendula DNA in saffron could be detected down to 0.01%. CONCLUSIONS: With the developed assay, C. officinalis can be reliably identified and admixtures of this species as adulterant of saffron can be revealed at low levels. Botanical Society of America 2015-11-03 /pmc/articles/PMC4651632/ /pubmed/26649268 http://dx.doi.org/10.3732/apps.1500069 Text en © 2015 Schmiderer et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Protocol Note
Schmiderer, Corinna
Lukas, Brigitte
Ruzicka, Joana
Novak, Johannes
DNA-based identification of Calendula officinalis (Asteraceae)(1)
title DNA-based identification of Calendula officinalis (Asteraceae)(1)
title_full DNA-based identification of Calendula officinalis (Asteraceae)(1)
title_fullStr DNA-based identification of Calendula officinalis (Asteraceae)(1)
title_full_unstemmed DNA-based identification of Calendula officinalis (Asteraceae)(1)
title_short DNA-based identification of Calendula officinalis (Asteraceae)(1)
title_sort dna-based identification of calendula officinalis (asteraceae)(1)
topic Protocol Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651632/
https://www.ncbi.nlm.nih.gov/pubmed/26649268
http://dx.doi.org/10.3732/apps.1500069
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