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Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1)
PREMISE OF THE STUDY: Microsatellite markers were characterized in the extremely specialized ephemeral wetland plant species Cyperus fuscus (Cyperaceae). The markers will be used for studying population genetics in natural vs. anthropogenic habitats, on a European scale, and the role of the soil see...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Botanical Society of America
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651633/ https://www.ncbi.nlm.nih.gov/pubmed/26649269 http://dx.doi.org/10.3732/apps.1500071 |
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author | Böckelmann, Jörg Wieser, David Tremetsberger, Karin Šumberová, Kateřina Bernhardt, Karl-Georg |
author_facet | Böckelmann, Jörg Wieser, David Tremetsberger, Karin Šumberová, Kateřina Bernhardt, Karl-Georg |
author_sort | Böckelmann, Jörg |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were characterized in the extremely specialized ephemeral wetland plant species Cyperus fuscus (Cyperaceae). The markers will be used for studying population genetics in natural vs. anthropogenic habitats, on a European scale, and the role of the soil seed bank in the life cycle of this ephemeral species. METHODS AND RESULTS: Twenty-one microsatellite loci were established and scored in two populations, with mean number of alleles of 2.6 and 2.9 and mean expected heterozygosity of 0.405 and 0.470, respectively. Forty-four additional loci with the number of alleles ranging from one to four (mean = 2.1) were successfully amplified in seven individuals. CONCLUSIONS: The novel microsatellite markers will be useful for studying the genetic structure of populations of this ephemeral plant as well as their seed bank. |
format | Online Article Text |
id | pubmed-4651633 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Botanical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-46516332015-12-08 Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) Böckelmann, Jörg Wieser, David Tremetsberger, Karin Šumberová, Kateřina Bernhardt, Karl-Georg Appl Plant Sci Primer Note PREMISE OF THE STUDY: Microsatellite markers were characterized in the extremely specialized ephemeral wetland plant species Cyperus fuscus (Cyperaceae). The markers will be used for studying population genetics in natural vs. anthropogenic habitats, on a European scale, and the role of the soil seed bank in the life cycle of this ephemeral species. METHODS AND RESULTS: Twenty-one microsatellite loci were established and scored in two populations, with mean number of alleles of 2.6 and 2.9 and mean expected heterozygosity of 0.405 and 0.470, respectively. Forty-four additional loci with the number of alleles ranging from one to four (mean = 2.1) were successfully amplified in seven individuals. CONCLUSIONS: The novel microsatellite markers will be useful for studying the genetic structure of populations of this ephemeral plant as well as their seed bank. Botanical Society of America 2015-11-04 /pmc/articles/PMC4651633/ /pubmed/26649269 http://dx.doi.org/10.3732/apps.1500071 Text en © 2015 Böckelmann et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA). |
spellingShingle | Primer Note Böckelmann, Jörg Wieser, David Tremetsberger, Karin Šumberová, Kateřina Bernhardt, Karl-Georg Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title | Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title_full | Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title_fullStr | Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title_full_unstemmed | Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title_short | Isolation of nuclear microsatellite markers for Cyperus fuscus (Cyperaceae)(1) |
title_sort | isolation of nuclear microsatellite markers for cyperus fuscus (cyperaceae)(1) |
topic | Primer Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651633/ https://www.ncbi.nlm.nih.gov/pubmed/26649269 http://dx.doi.org/10.3732/apps.1500071 |
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